Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZVC entry

There are 2 chains in PDB entry 7ZVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 132HIS 408
C
 GLY 5GLY 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7ZVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
180 184Right-handed 310
Helix 2
AA2
A
194 199Right-handed alpha
Helix 3
AA3
A
278 282Right-handed 310
Helix 4
AA4
A
318 322Right-handed 310
Helix 5
AA5
A
345 349Right-handed 310
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There are 3 sheets in PDB entry 7ZVC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 210first strand
Strand 2
A
185 193anti-parallel
Strand 3
A
169 178anti-parallel
Strand 4
A
291 299anti-parallel
Strand 5
A
134 142anti-parallel
Strand 6
A
350 352anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 229first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
251 258anti-parallel
Strand 5
A
150 156anti-parallel
Strand 6
A
327 335anti-parallel
Strand 7
A
341 342anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 229first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
251 258anti-parallel
Strand 5
A
150 156anti-parallel
Strand 6
A
327 335anti-parallel
Strand 7
A
370 375anti-parallel
Strand 8
A
360 365anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il