Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZVD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZVD entry

There are 2 chains in PDB entry 7ZVD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
 GLN 28PHE 88
N
 ALA 90ASN 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7ZVD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
N
41 47Right-handed alpha
Helix 2
AA2
N
47 58Right-handed alpha
Helix 3
AA3
N
76 85Right-handed alpha
Helix 4
AA4
N
99 104Right-handed alpha
Helix 5
AA5
N
114 127Right-handed alpha
Helix 6
AA6
N
143 145Right-handed 310
Helix 7
AA7
N
146 158Right-handed alpha
Helix 8
AA8
N
176 191Right-handed alpha
Helix 9
AA9
N
192 194Right-handed 310
Helix 10
AB1
N
201 204Right-handed 310
Helix 11
AB2
N
205 217Right-handed alpha
Helix 12
AB3
N
246 251Right-handed alpha
Helix 13
AB4
N
253 259Right-handed alpha
Helix 14
AB5
N
262 273Right-handed alpha
Helix 15
AB6
N
280 294Right-handed alpha
Helix 16
AB7
N
299 301Right-handed 310
Helix 17
AB8
N
315 320Right-handed 310
Helix 18
AB9
N
321 325Right-handed 310
Helix 19
AC1
N
424 428Right-handed alpha
Helix 20
AC2
N
435 447Right-handed alpha
Helix 21
AC3
N
454 476Right-handed alpha
Helix 22
AC4
N
489 499Right-handed alpha
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There are 2 sheets in PDB entry 7ZVD. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
105 109first strand
Strand 2
N
65 71parallel
Strand 3
N
32 37parallel
Strand 4
N
135 140parallel
Strand 5
N
165 170parallel
Strand 6
N
196 199parallel
Strand 7
N
452 453anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
415 423first strand
Strand 2
N
399 407anti-parallel
Strand 3
N
389 395anti-parallel
Strand 4
N
366 373anti-parallel
Strand 5
N
230 238anti-parallel
Strand 6
N
354 359parallel
Strand 7
N
337 342anti-parallel
Strand 8
N
303 309anti-parallel
Strand 9
N
480 483parallel
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