Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZYA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ZYA entry

There is 1 chain in PDB entry 7ZYA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 19ARG 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7ZYA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
46 51Right-handed 310
Helix 2
AA2
A
74 81Right-handed 310
Helix 3
AA3
A
93 106Right-handed alpha
Helix 4
AA4
A
126 142Right-handed alpha
Helix 5
AA5
A
172 187Right-handed alpha
Helix 6
AA6
A
207 214Right-handed alpha
Helix 7
AA7
A
229 233Right-handed 310
Helix 8
AA8
A
244 253Right-handed alpha
Helix 9
AA9
A
278 290Right-handed alpha
Helix 10
AB1
A
302 309Right-handed alpha
Helix 11
AB2
A
311 321Right-handed alpha
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There are 2 sheets in PDB entry 7ZYA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
71 72first strand
Strand 2
A
58 66anti-parallel
Strand 3
A
109 115parallel
Strand 4
A
161 165parallel
Strand 5
A
193 196parallel
Strand 6
A
218 222parallel
Strand 7
A
261 267parallel
Strand 8
A
295 301parallel
Strand 9
A
28 33parallel
Strand 10
A
58 66parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
82 84first strand
Strand 2
A
87 92anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il