Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZZQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ZZQ entry

There are 30 chains in PDB entry 7ZZQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 7	VAL 151
B	LYS 7	SER 153
C	LYS 7	VAL 151
D	LYS 7	SER 153
E	LYS 7	VAL 151
F	LYS 7	THR 156
G	LYS 7	VAL 151
H	LYS 7	SER 153
I	LYS 7	VAL 151
J	LYS 7	ARG 152
K	LYS 7	VAL 151
L	LYS 7	THR 156
M	LYS 7	VAL 151
N	LYS 7	SER 153
O	LYS 7	VAL 151
P	LYS 7	SER 154
Q	ASP 313	ARG 346
R	PRO 312	ARG 346
S	ASP 313	ARG 346
T	PRO 312	ARG 346
U	ASP 313	GLY 327
V	PRO 337	ARG 346
W	VAL 151	THR 156
X	ASP 313	GLY 326
Y	PRO 335	ARG 345
Z	ASP 313	GLY 327
a	ARG 336	ARG 345
b	ASP 313	LEU 333
c	VAL 151	THR 156
d	PRO 337	ARG 346

There are 84 helices in PDB entry 7ZZQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	25	Right-handed alpha
Helix 2	AA2	A	27	43	Right-handed alpha
Helix 3	AA3	A	52	68	Right-handed alpha
Helix 4	AA4	A	78	81	Right-handed 310
Helix 5	AA5	A	104	116	Right-handed alpha
Helix 6	AA6	B	10	25	Right-handed alpha
Helix 7	AA7	B	27	43	Right-handed alpha
Helix 8	AA8	B	52	68	Right-handed alpha
Helix 9	AA9	B	104	118	Right-handed alpha
Helix 10	AB1	C	10	25	Right-handed alpha
Helix 11	AB2	C	27	45	Right-handed alpha
Helix 12	AB3	C	52	68	Right-handed alpha
Helix 13	AB4	C	104	116	Right-handed alpha
Helix 14	AB5	D	10	25	Right-handed alpha
Helix 15	AB6	D	26	45	Right-handed alpha
Helix 16	AB7	D	52	68	Right-handed alpha
Helix 17	AB8	D	104	118	Right-handed alpha
Helix 18	AB9	E	10	26	Right-handed alpha
Helix 19	AC1	E	27	45	Right-handed alpha
Helix 20	AC2	E	52	68	Right-handed alpha
Helix 21	AC3	E	104	117	Right-handed alpha
Helix 22	AC4	F	10	25	Right-handed alpha
Helix 23	AC5	F	26	45	Right-handed alpha
Helix 24	AC6	F	52	68	Right-handed alpha
Helix 25	AC7	F	104	118	Right-handed alpha
Helix 26	AC8	G	10	25	Right-handed alpha
Helix 27	AC9	G	27	42	Right-handed alpha
Helix 28	AD1	G	52	68	Right-handed alpha
Helix 29	AD2	G	104	117	Right-handed alpha
Helix 30	AD3	H	10	25	Right-handed alpha
Helix 31	AD4	H	26	45	Right-handed alpha
Helix 32	AD5	H	52	68	Right-handed alpha
Helix 33	AD6	H	104	118	Right-handed alpha
Helix 34	AD7	I	10	26	Right-handed alpha
Helix 35	AD8	I	27	43	Right-handed alpha
Helix 36	AD9	I	52	68	Right-handed alpha
Helix 37	AE1	I	104	117	Right-handed alpha
Helix 38	AE2	J	10	25	Right-handed alpha
Helix 39	AE3	J	26	43	Right-handed alpha
Helix 40	AE4	J	52	68	Right-handed alpha
Helix 41	AE5	J	104	118	Right-handed alpha
Helix 42	AE6	K	10	26	Right-handed alpha
Helix 43	AE7	K	27	43	Right-handed alpha
Helix 44	AE8	K	52	68	Right-handed alpha
Helix 45	AE9	K	104	116	Right-handed alpha
Helix 46	AF1	L	10	25	Right-handed alpha
Helix 47	AF2	L	26	45	Right-handed alpha
Helix 48	AF3	L	52	68	Right-handed alpha
Helix 49	AF4	L	104	118	Right-handed alpha
Helix 50	AF5	M	10	26	Right-handed alpha
Helix 51	AF6	M	27	43	Right-handed alpha
Helix 52	AF7	M	52	68	Right-handed alpha
Helix 53	AF8	M	104	117	Right-handed alpha
Helix 54	AF9	N	10	25	Right-handed alpha
Helix 55	AG1	N	26	45	Right-handed alpha
Helix 56	AG2	N	52	68	Right-handed alpha
Helix 57	AG3	N	104	118	Right-handed alpha
Helix 58	AG4	O	10	25	Right-handed alpha
Helix 59	AG5	O	27	45	Right-handed alpha
Helix 60	AG6	O	52	68	Right-handed alpha
Helix 61	AG7	O	104	117	Right-handed alpha
Helix 62	AG8	P	10	25	Right-handed alpha
Helix 63	AG9	P	26	45	Right-handed alpha
Helix 64	AH1	P	52	68	Right-handed alpha
Helix 65	AH2	P	104	118	Right-handed alpha
Helix 66	AH3	Q	317	326	Right-handed alpha
Helix 67	AH4	Q	328	333	Right-handed alpha
Helix 68	AH5	Q	338	346	Right-handed alpha
Helix 69	AH6	R	317	326	Right-handed alpha
Helix 70	AH7	R	328	333	Right-handed alpha
Helix 71	AH8	R	338	346	Right-handed alpha
Helix 72	AH9	S	317	327	Right-handed alpha
Helix 73	AI1	S	338	346	Right-handed alpha
Helix 74	AI2	T	317	327	Right-handed alpha
Helix 75	AI3	T	338	346	Right-handed alpha
Helix 76	AI4	U	317	327	Right-handed alpha
Helix 77	AI5	V	338	346	Right-handed alpha
Helix 78	AI6	X	317	326	Right-handed alpha
Helix 79	AI7	Y	338	345	Right-handed alpha
Helix 80	AI8	Z	317	327	Right-handed alpha
Helix 81	AI9	a	338	345	Right-handed alpha
Helix 82	AJ1	b	317	326	Right-handed alpha
Helix 83	AJ2	b	328	333	Right-handed alpha
Helix 84	AJ3	d	338	346	Right-handed alpha

There are 16 sheets in PDB entry 7ZZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	77	first strand
Strand 2	A	82	88	anti-parallel
Strand 3	A	145	150	anti-parallel
Strand 4	A	127	129	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	77	first strand
Strand 2	B	82	88	anti-parallel
Strand 3	B	145	151	anti-parallel
Strand 4	B	124	130	anti-parallel
Strand 5	W	153	156	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	77	first strand
Strand 2	C	82	88	anti-parallel
Strand 3	C	145	150	anti-parallel
Strand 4	C	127	130	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	77	first strand
Strand 2	D	82	88	anti-parallel
Strand 3	D	145	151	anti-parallel
Strand 4	D	126	130	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	76	first strand
Strand 2	E	83	88	anti-parallel
Strand 3	E	145	150	anti-parallel
Strand 4	E	127	130	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	77	first strand
Strand 2	F	82	88	anti-parallel
Strand 3	F	145	151	anti-parallel
Strand 4	F	126	130	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	153	156	first strand
Strand 2	J	124	130	parallel
Strand 3	J	145	151	anti-parallel
Strand 4	J	82	88	anti-parallel
Strand 5	J	71	77	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	77	first strand
Strand 2	G	82	88	anti-parallel
Strand 3	G	145	149	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	77	first strand
Strand 2	H	82	88	anti-parallel
Strand 3	H	145	151	anti-parallel
Strand 4	H	125	130	anti-parallel
Strand 5	L	154	156	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	71	76	first strand
Strand 2	I	82	88	anti-parallel
Strand 3	I	145	150	anti-parallel
Strand 4	I	127	130	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	77	first strand
Strand 2	K	82	88	anti-parallel
Strand 3	K	145	150	anti-parallel
Strand 4	K	127	130	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	71	77	first strand
Strand 2	L	82	88	anti-parallel
Strand 3	L	145	151	anti-parallel
Strand 4	L	126	130	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	71	77	first strand
Strand 2	M	82	88	anti-parallel
Strand 3	M	145	150	anti-parallel
Strand 4	M	127	130	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	71	77	first strand
Strand 2	N	82	88	anti-parallel
Strand 3	N	145	151	anti-parallel
Strand 4	N	124	130	anti-parallel
Strand 5	c	153	155	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	71	77	first strand
Strand 2	O	82	88	anti-parallel
Strand 3	O	145	150	anti-parallel
Strand 4	O	127	130	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	71	77	first strand
Strand 2	P	82	88	anti-parallel
Strand 3	P	145	151	anti-parallel
Strand 4	P	126	130	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ZZQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ZZQ