Analysis of interatomic Contacts of Structural Units in PDB entry:
8A0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A0A entry

There are 2 chains in PDB entry 8A0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LEU 320
B
 GLY 1LEU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8A0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
16 37Right-handed alpha
Helix 3
AA3
A
39 43Right-handed 310
Helix 4
AA4
A
44 55Right-handed alpha
Helix 5
AA5
A
59 80Right-handed alpha
Helix 6
AA6
A
88 93Right-handed 310
Helix 7
AA7
A
96 102Right-handed 310
Helix 8
AA8
A
110 121Right-handed alpha
Helix 9
AA9
A
123 135Right-handed alpha
Helix 10
AB1
A
139 141Right-handed 310
Helix 11
AB2
A
142 147Right-handed alpha
Helix 12
AB3
A
149 158Right-handed alpha
Helix 13
AB4
A
178 189Right-handed alpha
Helix 14
AB5
A
197 200Right-handed 310
Helix 15
AB6
A
220 224Right-handed 310
Helix 16
AB7
A
231 247Right-handed alpha
Helix 17
AB8
A
252 273Right-handed alpha
Helix 18
AB9
A
276 287Right-handed alpha
Helix 19
AC1
A
293 302Right-handed alpha
Helix 20
AC2
A
306 319Right-handed alpha
Helix 21
AC3
B
3 13Right-handed alpha
Helix 22
AC4
B
15 37Right-handed alpha
Helix 23
AC5
B
39 43Right-handed 310
Helix 24
AC6
B
44 55Right-handed alpha
Helix 25
AC7
B
59 80Right-handed alpha
Helix 26
AC8
B
88 92Right-handed 310
Helix 27
AC9
B
96 102Right-handed 310
Helix 28
AD1
B
110 121Right-handed alpha
Helix 29
AD2
B
123 136Right-handed alpha
Helix 30
AD3
B
139 141Right-handed 310
Helix 31
AD4
B
142 147Right-handed alpha
Helix 32
AD5
B
149 158Right-handed alpha
Helix 33
AD6
B
178 189Right-handed alpha
Helix 34
AD7
B
197 200Right-handed 310
Helix 35
AD8
B
220 224Right-handed 310
Helix 36
AD9
B
231 247Right-handed alpha
Helix 37
AE1
B
252 273Right-handed alpha
Helix 38
AE2
B
277 287Right-handed alpha
Helix 39
AE3
B
293 301Right-handed alpha
Helix 40
AE4
B
306 314Right-handed alpha
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There are 4 sheets in PDB entry 8A0A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 167first strand
Strand 2
A
171 176anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
207 209anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 167first strand
Strand 2
B
171 176anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 195first strand
Strand 2
B
207 209anti-parallel
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