Analysis of interatomic Contacts of Structural Units in PDB entry:
8A0N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A0N entry

There is 1 chain in PDB entry 8A0N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY -9ALA 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8A0N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
29 42Right-handed alpha
Helix 2
AA2
B
55 59Right-handed alpha
Helix 3
AA3
B
60 61Right-handed 310
Helix 4
AA4
B
62 66Right-handed 310
Helix 5
AA5
B
94 105Right-handed alpha
Helix 6
AA6
B
122 130Right-handed alpha
Helix 7
AA7
B
148 152Right-handed 310
Helix 8
AA8
B
162 164Right-handed 310
Helix 9
AA9
B
170 179Right-handed alpha
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There are 3 sheets in PDB entry 8A0N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
90 92anti-parallel
Strand 3
B
71 76parallel
Strand 4
B
48 54parallel
Strand 5
B
112 119parallel
Strand 6
B
5 13parallel
Strand 7
B
137 145parallel
Strand 8
B
192 201anti-parallel
Strand 9
B
166 168anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
112 119anti-parallel
Strand 3
B
5 13parallel
Strand 4
B
137 145parallel
Strand 5
B
192 201anti-parallel
Strand 6
B
187 189anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
157 158anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il