Analysis of interatomic Contacts of Structural Units in PDB entry:
8A1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A1H entry

There is 1 chain in PDB entry 8A1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 21LEU 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8A1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 43Right-handed 310
Helix 2
AA2
A
56 61Right-handed alpha
Helix 3
AA3
A
65 86Right-handed alpha
Helix 4
AA4
A
94 99Right-handed alpha
Helix 5
AA5
A
103 115Right-handed alpha
Helix 6
AA6
A
127 136Right-handed alpha
Helix 7
AA7
A
155 157Right-handed 310
Helix 8
AA8
A
158 163Right-handed alpha
Helix 9
AA9
A
170 183Right-handed alpha
Helix 10
AB1
A
199 203Right-handed 310
Helix 11
AB2
A
208 214Right-handed alpha
Helix 12
AB3
A
225 235Right-handed alpha
Helix 13
AB4
A
252 267Right-handed alpha
Helix 14
AB5
A
268 271Right-handed 310
Helix 15
AB6
A
293 299Right-handed alpha
Helix 16
AB7
A
303 318Right-handed alpha
Helix 17
AB8
A
323 336Right-handed alpha
Helix 18
AB9
A
336 349Right-handed alpha
Helix 19
AC1
A
350 355Right-handed 310
Helix 20
AC2
A
365 370Right-handed 310
Helix 21
AC3
A
375 389Right-handed alpha
Helix 22
AC4
A
392 399Right-handed alpha
Helix 23
AC5
A
399 407Right-handed alpha
Helix 24
AC6
A
410 422Right-handed alpha
Helix 25
AC7
A
426 436Right-handed alpha
Helix 26
AC8
A
454 462Right-handed alpha
Helix 27
AC9
A
463 468Right-handed 310
Helix 28
AD1
A
481 494Right-handed alpha
Helix 29
AD2
A
494 499Right-handed alpha
Helix 30
AD3
A
501 506Right-handed alpha
Helix 31
AD4
A
506 513Right-handed alpha
Helix 32
AD5
A
515 532Right-handed alpha
Helix 33
AD6
A
533 536Right-handed 310
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There are 2 sheets in PDB entry 8A1H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
48 53parallel
Strand 3
A
25 29parallel
Strand 4
A
119 123parallel
Strand 5
A
143 147parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
246 247anti-parallel
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