Analysis of interatomic Contacts of Structural Units in PDB entry:
8A2Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A2Q entry

There are 4 chains in PDB entry 8A2Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 48GLU 1398
B
 GLY 30ASP 1299
S
 A 1 T 29
T
 A 30 T 58
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are123 helices in PDB entry 8A2Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 57Right-handed alpha
Helix 2
AA2
A
73 88Right-handed alpha
Helix 3
AA3
A
89 92Right-handed 310
Helix 4
AA4
A
93 108Right-handed alpha
Helix 5
AA5
A
108 116Right-handed alpha
Helix 6
AA6
A
139 144Right-handed alpha
Helix 7
AA7
A
148 163Right-handed alpha
Helix 8
AA8
A
175 184Right-handed alpha
Helix 9
AA9
A
191 206Right-handed alpha
Helix 10
AB1
A
207 222Right-handed alpha
Helix 11
AB2
A
226 241Right-handed alpha
Helix 12
AB3
A
244 255Right-handed alpha
Helix 13
AB4
A
258 272Right-handed alpha
Helix 14
AB5
A
280 292Right-handed alpha
Helix 15
AB6
A
296 312Right-handed alpha
Helix 16
AB7
A
350 360Right-handed alpha
Helix 17
AB8
A
360 374Right-handed alpha
Helix 18
AB9
A
375 378Right-handed 310
Helix 19
AC1
A
381 394Right-handed alpha
Helix 20
AC2
A
400 413Right-handed alpha
Helix 21
AC3
A
416 427Right-handed alpha
Helix 22
AC4
A
427 434Right-handed alpha
Helix 23
AC5
A
435 447Right-handed alpha
Helix 24
AC6
A
450 466Right-handed alpha
Helix 25
AC7
A
469 486Right-handed alpha
Helix 26
AC8
A
488 506Right-handed alpha
Helix 27
AC9
A
506 513Right-handed alpha
Helix 28
AD1
A
513 523Right-handed alpha
Helix 29
AD2
A
528 546Right-handed alpha
Helix 30
AD3
A
550 566Right-handed alpha
Helix 31
AD4
A
572 586Right-handed alpha
Helix 32
AD5
A
608 624Right-handed alpha
Helix 33
AD6
A
626 644Right-handed alpha
Helix 34
AD7
A
649 658Right-handed alpha
Helix 35
AD8
A
658 668Right-handed alpha
Helix 36
AD9
A
702 708Right-handed alpha
Helix 37
AE1
A
731 747Right-handed alpha
Helix 38
AE2
A
750 755Right-handed alpha
Helix 39
AE3
A
756 758Right-handed 310
Helix 40
AE4
A
766 771Right-handed 310
Helix 41
AE5
A
772 776Right-handed 310
Helix 42
AE6
A
780 803Right-handed alpha
Helix 43
AE7
A
809 834Right-handed alpha
Helix 44
AE8
A
930 936Right-handed 310
Helix 45
AE9
A
960 979Right-handed alpha
Helix 46
AF1
A
1002 1006Right-handed 310
Helix 47
AF2
A
1007 1018Right-handed alpha
Helix 48
AF3
A
1018 1036Right-handed alpha
Helix 49
AF4
A
1050 1072Right-handed alpha
Helix 50
AF5
A
1073 1080Right-handed 310
Helix 51
AF6
A
1081 1097Right-handed alpha
Helix 52
AF7
A
1105 1119Right-handed alpha
Helix 53
AF8
A
1120 1123Right-handed 310
Helix 54
AF9
A
1126 1141Right-handed alpha
Helix 55
AG1
A
1146 1163Right-handed alpha
Helix 56
AG2
A
1175 1193Right-handed alpha
Helix 57
AG3
A
1195 1215Right-handed alpha
Helix 58
AG4
A
1230 1248Right-handed alpha
Helix 59
AG5
A
1259 1281Right-handed alpha
Helix 60
AG6
A
1282 1284Right-handed 310
Helix 61
AG7
A
1287 1316Right-handed alpha
Helix 62
AG8
A
1321 1349Right-handed alpha
Helix 63
AG9
A
1350 1355Right-handed alpha
Helix 64
AH1
A
1356 1377Right-handed alpha
Helix 65
AH2
A
1378 1379Right-handed 310
Helix 66
AH3
A
1380 1382Right-handed 310
Helix 67
AH4
B
31 37Right-handed alpha
Helix 68
AH5
B
42 54Right-handed alpha
Helix 69
AH6
B
61 79Right-handed alpha
Helix 70
AH7
B
82 97Right-handed alpha
Helix 71
AH8
B
98 100Right-handed 310
Helix 72
AH9
B
101 119Right-handed alpha
Helix 73
AI1
B
123 137Right-handed alpha
Helix 74
AI2
B
157 167Right-handed alpha
Helix 75
AI3
B
173 184Right-handed alpha
Helix 76
AI4
B
187 201Right-handed alpha
Helix 77
AI5
B
209 224Right-handed alpha
Helix 78
AI6
B
225 245Right-handed alpha
Helix 79
AI7
B
264 284Right-handed alpha
Helix 80
AI8
B
285 302Right-handed alpha
Helix 81
AI9
B
308 318Right-handed alpha
Helix 82
AJ1
B
324 349Right-handed alpha
Helix 83
AJ2
B
349 356Right-handed alpha
Helix 84
AJ3
B
361 373Right-handed alpha
Helix 85
AJ4
B
374 376Right-handed 310
Helix 86
AJ5
B
378 396Right-handed alpha
Helix 87
AJ6
B
416 435Right-handed alpha
Helix 88
AJ7
B
438 451Right-handed alpha
Helix 89
AJ8
B
458 472Right-handed alpha
Helix 90
AJ9
B
474 479Right-handed alpha
Helix 91
AK1
B
482 488Right-handed alpha
Helix 92
AK2
B
496 512Right-handed alpha
Helix 93
AK3
B
512 528Right-handed alpha
Helix 94
AK4
B
531 549Right-handed alpha
Helix 95
AK5
B
583 595Right-handed alpha
Helix 96
AK6
B
596 598Right-handed 310
Helix 97
AK7
B
600 618Right-handed alpha
Helix 98
AK8
B
619 638Right-handed alpha
Helix 99
AK9
B
648 653Right-handed 310
Helix 100
AL1
B
665 684Right-handed alpha
Helix 101
AL2
B
702 719Right-handed alpha
Helix 102
AL3
B
737 765Right-handed alpha
Helix 103
AL4
B
768 789Right-handed alpha
Helix 104
AL5
B
810 822Right-handed alpha
Helix 105
AL6
B
831 839Right-handed alpha
Helix 106
AL7
B
839 860Right-handed alpha
Helix 107
AL8
B
870 892Right-handed alpha
Helix 108
AL9
B
907 925Right-handed alpha
Helix 109
AM1
B
929 937Right-handed alpha
Helix 110
AM2
B
950 972Right-handed alpha
Helix 111
AM3
B
978 994Right-handed alpha
Helix 112
AM4
B
1000 1017Right-handed alpha
Helix 113
AM5
B
1021 1038Right-handed alpha
Helix 114
AM6
B
1042 1057Right-handed alpha
Helix 115
AM7
B
1081 1107Right-handed alpha
Helix 116
AM8
B
1123 1147Right-handed alpha
Helix 117
AM9
B
1153 1180Right-handed alpha
Helix 118
AN1
B
1189 1203Right-handed alpha
Helix 119
AN2
B
1203 1225Right-handed alpha
Helix 120
AN3
B
1243 1251Right-handed alpha
Helix 121
AN4
B
1253 1274Right-handed alpha
Helix 122
AN5
B
1278 1282Right-handed 310
Helix 123
AN6
B
1295 1299Right-handed 310
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There are 3 sheets in PDB entry 8A2Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
669 670first strand
Strand 2
A
700 701anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
685 687first strand
Strand 2
A
762 764anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1384 1389first strand
Strand 2
B
1288 1293anti-parallel
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