Analysis of interatomic Contacts of Structural Units in PDB entry:
8A3C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8A3C entry

There are 4 chains in PDB entry 8A3C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 73	ASN 643
B	GLU 73	LEU 611
C	GLU 73	ARG 640
D	GLU 73	ARG 640

There are 59 helices in PDB entry 8A3C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	74	79	Right-handed alpha
Helix 2	AA2	A	87	97	Right-handed alpha
Helix 3	AA3	A	176	189	Right-handed alpha
Helix 4	AA4	A	192	200	Right-handed alpha
Helix 5	AA5	A	218	223	Right-handed alpha
Helix 6	AA6	A	430	435	Right-handed alpha
Helix 7	AA7	A	436	438	Right-handed 310
Helix 8	AA8	A	446	450	Right-handed alpha
Helix 9	AA9	A	470	472	Right-handed 310
Helix 10	AB1	A	534	540	Right-handed 310
Helix 11	AB2	A	547	561	Right-handed alpha
Helix 12	AB3	A	570	586	Right-handed alpha
Helix 13	AB4	A	594	610	Right-handed alpha
Helix 14	AB5	A	613	643	Right-handed alpha
Helix 15	AB6	B	74	79	Right-handed alpha
Helix 16	AB7	B	85	97	Right-handed alpha
Helix 17	AB8	B	97	103	Right-handed alpha
Helix 18	AB9	B	176	190	Right-handed alpha
Helix 19	AC1	B	192	200	Right-handed alpha
Helix 20	AC2	B	218	224	Right-handed alpha
Helix 21	AC3	B	230	235	Right-handed 310
Helix 22	AC4	B	376	380	Right-handed 310
Helix 23	AC5	B	431	435	Right-handed 310
Helix 24	AC6	B	446	450	Right-handed alpha
Helix 25	AC7	B	468	472	Right-handed 310
Helix 26	AC8	B	547	561	Right-handed alpha
Helix 27	AC9	B	570	586	Right-handed alpha
Helix 28	AD1	B	593	610	Right-handed alpha
Helix 29	AD2	C	75	80	Right-handed alpha
Helix 30	AD3	C	85	97	Right-handed alpha
Helix 31	AD4	C	97	102	Right-handed alpha
Helix 32	AD5	C	176	189	Right-handed alpha
Helix 33	AD6	C	192	200	Right-handed alpha
Helix 34	AD7	C	218	224	Right-handed alpha
Helix 35	AD8	C	230	235	Right-handed 310
Helix 36	AD9	C	433	438	Right-handed alpha
Helix 37	AE1	C	445	450	Right-handed alpha
Helix 38	AE2	C	470	472	Right-handed 310
Helix 39	AE3	C	547	561	Right-handed alpha
Helix 40	AE4	C	570	586	Right-handed alpha
Helix 41	AE5	C	594	610	Right-handed alpha
Helix 42	AE6	C	613	620	Right-handed alpha
Helix 43	AE7	C	626	640	Right-handed alpha
Helix 44	AE8	D	74	79	Right-handed alpha
Helix 45	AE9	D	85	97	Right-handed alpha
Helix 46	AF1	D	176	189	Right-handed alpha
Helix 47	AF2	D	192	200	Right-handed alpha
Helix 48	AF3	D	218	223	Right-handed alpha
Helix 49	AF4	D	230	234	Right-handed 310
Helix 50	AF5	D	430	435	Right-handed alpha
Helix 51	AF6	D	436	438	Right-handed 310
Helix 52	AF7	D	446	450	Right-handed alpha
Helix 53	AF8	D	468	472	Right-handed 310
Helix 54	AF9	D	536	540	Right-handed 310
Helix 55	AG1	D	547	561	Right-handed alpha
Helix 56	AG2	D	570	585	Right-handed alpha
Helix 57	AG3	D	594	609	Right-handed alpha
Helix 58	AG4	D	612	621	Right-handed alpha
Helix 59	AG5	D	626	640	Right-handed alpha

There are 38 sheets in PDB entry 8A3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	121	123	anti-parallel
Strand 3	A	541	542	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	134	first strand
Strand 2	A	517	526	anti-parallel
Strand 3	A	240	247	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	217	first strand
Strand 2	A	162	169	anti-parallel
Strand 3	A	149	156	anti-parallel
Strand 4	A	504	513	anti-parallel
Strand 5	A	259	265	anti-parallel
Strand 6	A	444	445	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	238	first strand
Strand 2	A	467	468	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	274	first strand
Strand 2	A	419	424	anti-parallel
Strand 3	A	473	477	parallel
Strand 4	A	494	496	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	280	first strand
Strand 2	A	413	416	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	321	first strand
Strand 2	A	325	328	anti-parallel
Strand 3	A	298	301	anti-parallel
Strand 4	A	286	290	anti-parallel
Strand 5	A	401	406	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	368	374	anti-parallel
Strand 3	A	383	387	anti-parallel
Strand 4	A	392	396	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	363	first strand
Strand 2	A	349	353	anti-parallel
Strand 3	A	408	410	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	133	first strand
Strand 2	B	518	529	anti-parallel
Strand 3	B	247	249	anti-parallel
Strand 4	B	451	452	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	237	243	first strand
Strand 2	B	518	529	anti-parallel
Strand 3	B	121	123	anti-parallel
Strand 4	B	541	542	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	211	217	first strand
Strand 2	B	162	169	anti-parallel
Strand 3	B	149	155	anti-parallel
Strand 4	B	506	513	anti-parallel
Strand 5	B	259	263	anti-parallel
Strand 6	B	442	445	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	274	first strand
Strand 2	B	419	424	anti-parallel
Strand 3	B	473	477	parallel
Strand 4	B	495	496	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	279	first strand
Strand 2	B	414	415	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	319	first strand
Strand 2	B	325	329	anti-parallel
Strand 3	B	298	301	anti-parallel
Strand 4	B	286	289	anti-parallel
Strand 5	B	405	406	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	351	first strand
Strand 2	B	360	363	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	374	first strand
Strand 2	B	382	387	anti-parallel
Strand 3	B	392	397	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	467	468	first strand
Strand 2	C	237	239	anti-parallel
Strand 3	C	527	529	anti-parallel
Strand 4	C	121	123	anti-parallel
Strand 5	C	541	542	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	133	first strand
Strand 2	C	517	521	anti-parallel
Strand 3	C	247	250	anti-parallel
Strand 4	C	451	454	anti-parallel
Strand 5	C	564	566	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	213	first strand
Strand 2	C	165	169	anti-parallel
Strand 3	C	149	156	anti-parallel
Strand 4	C	505	513	anti-parallel
Strand 5	C	259	263	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	244	first strand
Strand 2	C	523	524	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	274	first strand
Strand 2	C	419	420	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	279	first strand
Strand 2	C	414	416	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	283	first strand
Strand 2	C	408	410	anti-parallel
Strand 3	C	349	353	anti-parallel
Strand 4	C	358	359	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	287	first strand
Strand 2	C	405	406	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	321	first strand
Strand 2	C	326	328	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	342	first strand
Strand 2	C	368	371	anti-parallel
Strand 3	C	384	387	anti-parallel
Strand 4	C	392	395	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	473	477	parallel
Strand 3	C	494	496	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	527	529	first strand
Strand 2	D	121	124	anti-parallel
Strand 3	D	541	542	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	133	first strand
Strand 2	D	518	522	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	162	169	anti-parallel
Strand 3	D	211	217	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	505	510	anti-parallel
Strand 3	D	259	263	anti-parallel
Strand 4	D	444	445	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	271	first strand
Strand 2	D	421	425	anti-parallel
Strand 3	D	474	478	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	279	first strand
Strand 2	D	414	415	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	289	first strand
Strand 2	D	298	300	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	342	first strand
Strand 2	D	368	375	anti-parallel
Strand 3	D	383	387	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	352	first strand
Strand 2	D	359	363	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	564	566	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8A3C

Analysis of interatomic Contacts of Structural Units in PDB entry:
8A3C