Analysis of interatomic Contacts of Structural Units in PDB entry:
8A3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A3V entry

There are 4 chains in PDB entry 8A3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 10ASN 459
B
 ILE 13ASN 459
C
 THR 7LYS 155
D
 ASP 10ASP 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 8A3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
27 41Right-handed alpha
Helix 3
AA3
A
44 52Right-handed alpha
Helix 4
AA4
A
53 57Right-handed 310
Helix 5
AA5
A
59 75Right-handed alpha
Helix 6
AA6
A
80 91Right-handed alpha
Helix 7
AA7
A
98 109Right-handed alpha
Helix 8
AA8
A
115 145Right-handed alpha
Helix 9
AA9
A
150 169Right-handed alpha
Helix 10
AB1
A
178 196Right-handed alpha
Helix 11
AB2
A
208 216Right-handed alpha
Helix 12
AB3
A
233 249Right-handed alpha
Helix 13
AB4
A
261 275Right-handed alpha
Helix 14
AB5
A
277 284Right-handed alpha
Helix 15
AB6
A
287 305Right-handed alpha
Helix 16
AB7
A
316 332Right-handed alpha
Helix 17
AB8
A
341 345Right-handed 310
Helix 18
AB9
A
347 351Right-handed 310
Helix 19
AC1
A
353 373Right-handed alpha
Helix 20
AC2
A
384 390Right-handed alpha
Helix 21
AC3
A
396 401Right-handed alpha
Helix 22
AC4
A
402 403Right-handed 310
Helix 23
AC5
A
404 408Right-handed 310
Helix 24
AC6
A
417 422Right-handed alpha
Helix 25
AC7
A
452 455Right-handed 310
Helix 26
AC8
B
14 20Right-handed alpha
Helix 27
AC9
B
27 42Right-handed alpha
Helix 28
AD1
B
44 52Right-handed alpha
Helix 29
AD2
B
53 57Right-handed 310
Helix 30
AD3
B
59 75Right-handed alpha
Helix 31
AD4
B
80 91Right-handed alpha
Helix 32
AD5
B
98 109Right-handed alpha
Helix 33
AD6
B
115 145Right-handed alpha
Helix 34
AD7
B
150 169Right-handed alpha
Helix 35
AD8
B
178 196Right-handed alpha
Helix 36
AD9
B
208 216Right-handed alpha
Helix 37
AE1
B
233 249Right-handed alpha
Helix 38
AE2
B
261 275Right-handed alpha
Helix 39
AE3
B
277 284Right-handed alpha
Helix 40
AE4
B
287 305Right-handed alpha
Helix 41
AE5
B
316 332Right-handed alpha
Helix 42
AE6
B
341 345Right-handed 310
Helix 43
AE7
B
347 351Right-handed 310
Helix 44
AE8
B
353 373Right-handed alpha
Helix 45
AE9
B
384 390Right-handed alpha
Helix 46
AF1
B
396 401Right-handed alpha
Helix 47
AF2
B
402 403Right-handed 310
Helix 48
AF3
B
404 408Right-handed 310
Helix 49
AF4
B
417 422Right-handed alpha
Helix 50
AF5
B
452 455Right-handed 310
Helix 51
AF6
C
8 24Right-handed alpha
Helix 52
AF7
C
24 39Right-handed alpha
Helix 53
AF8
C
63 73Right-handed alpha
Helix 54
AF9
C
73 84Right-handed alpha
Helix 55
AG1
C
101 109Right-handed alpha
Helix 56
AG2
C
121 133Right-handed alpha
Helix 57
AG3
C
136 150Right-handed alpha
Helix 58
AG4
D
13 39Right-handed alpha
Helix 59
AG5
D
63 73Right-handed alpha
Helix 60
AG6
D
73 84Right-handed alpha
Helix 61
AG7
D
98 100Right-handed 310
Helix 62
AG8
D
101 109Right-handed alpha
Helix 63
AG9
D
121 133Right-handed alpha
Helix 64
AH1
D
136 150Right-handed alpha
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There are 4 sheets in PDB entry 8A3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 310first strand
Strand 2
A
253 256parallel
Strand 3
A
336 339parallel
Strand 4
A
376 381parallel
Strand 5
A
223 228parallel
Strand 6
A
411 416parallel
Strand 7
A
430 438anti-parallel
Strand 8
A
444 451anti-parallel
Strand 9
A
456 458anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 310first strand
Strand 2
B
253 256parallel
Strand 3
B
336 339parallel
Strand 4
B
376 381parallel
Strand 5
B
223 228parallel
Strand 6
B
411 416parallel
Strand 7
B
430 438anti-parallel
Strand 8
B
444 451anti-parallel
Strand 9
B
456 458anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 53first strand
Strand 2
C
56 61anti-parallel
Strand 3
C
91 96parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 53first strand
Strand 2
D
56 61anti-parallel
Strand 3
D
91 96parallel
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