Analysis of interatomic Contacts of Structural Units in PDB entry:
8A58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A58 entry

There are 4 chains in PDB entry 8A58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2TRP 145
C
 MET 1GLU 82
D
 ALA 5ARG 84
B
 SER -1HIS 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8A58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
92 96Right-handed 310
Helix 3
AA3
A
104 117Right-handed alpha
Helix 4
AA4
A
127 136Right-handed alpha
Helix 5
AA5
C
4 14Right-handed alpha
Helix 6
AA6
C
37 44Right-handed alpha
Helix 7
AA7
C
61 63Right-handed 310
Helix 8
AA8
C
66 81Right-handed alpha
Helix 9
AA9
D
8 13Right-handed alpha
Helix 10
AB1
D
37 44Right-handed alpha
Helix 11
AB2
D
61 63Right-handed 310
Helix 12
AB3
D
66 81Right-handed alpha
Helix 13
AB4
B
0 18Right-handed alpha
Helix 14
AB5
B
92 96Right-handed 310
Helix 15
AB6
B
104 119Right-handed alpha
Helix 16
AB7
B
127 136Right-handed alpha
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There are 6 sheets in PDB entry 8A58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
53 59anti-parallel
Strand 4
A
70 74anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 36first strand
Strand 2
C
26 28anti-parallel
Strand 3
C
64 65anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 50first strand
Strand 2
C
57 59anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 36first strand
Strand 2
D
26 28anti-parallel
Strand 3
D
64 65anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 50first strand
Strand 2
D
57 59anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
36 42anti-parallel
Strand 3
B
53 59anti-parallel
Strand 4
B
70 74anti-parallel
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