Analysis of interatomic Contacts of Structural Units in PDB entry:
8A5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A5Z entry

There are 2 chains in PDB entry 8A5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ALA 293
B
 MET 1GLN 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8A5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
34 37Right-handed 310
Helix 3
AA3
A
38 43Right-handed alpha
Helix 4
AA4
A
51 59Right-handed alpha
Helix 5
AA5
A
68 77Right-handed alpha
Helix 6
AA6
A
81 86Right-handed 310
Helix 7
AA7
A
97 111Right-handed alpha
Helix 8
AA8
A
123 127Right-handed 310
Helix 9
AA9
A
139 146Right-handed alpha
Helix 10
AB1
A
146 154Right-handed alpha
Helix 11
AB2
A
165 196Right-handed alpha
Helix 12
AB3
A
198 226Right-handed alpha
Helix 13
AB4
A
238 256Right-handed alpha
Helix 14
AB5
A
260 276Right-handed alpha
Helix 15
AB6
A
282 290Right-handed 310
Helix 16
AB7
B
11 24Right-handed alpha
Helix 17
AB8
B
34 37Right-handed 310
Helix 18
AB9
B
38 43Right-handed alpha
Helix 19
AC1
B
51 59Right-handed alpha
Helix 20
AC2
B
68 77Right-handed alpha
Helix 21
AC3
B
81 86Right-handed 310
Helix 22
AC4
B
97 111Right-handed alpha
Helix 23
AC5
B
123 127Right-handed 310
Helix 24
AC6
B
139 146Right-handed alpha
Helix 25
AC7
B
146 154Right-handed alpha
Helix 26
AC8
B
165 195Right-handed alpha
Helix 27
AC9
B
198 226Right-handed alpha
Helix 28
AD1
B
238 256Right-handed alpha
Helix 29
AD2
B
260 276Right-handed alpha
Helix 30
AD3
B
282 290Right-handed 310
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There are 2 sheets in PDB entry 8A5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
28 31parallel
Strand 3
A
5 8parallel
Strand 4
A
61 64parallel
Strand 5
A
89 92parallel
Strand 6
A
114 121parallel
Strand 7
A
133 137anti-parallel
Strand 8
A
156 161parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
28 31parallel
Strand 3
B
5 8parallel
Strand 4
B
61 64parallel
Strand 5
B
89 92parallel
Strand 6
B
114 120parallel
Strand 7
B
133 137anti-parallel
Strand 8
B
156 161parallel
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