Analysis of interatomic Contacts of Structural Units in PDB entry:
8A63

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8A63 entry

There are 29 chains in PDB entry 8A63 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	LYS 3	GLU 60
2	ALA 3	GLU 61
3	LYS 3	GLU 58
4	MET 1	THR 59
5	ALA 2	VAL 54
6	ARG 2	THR 48
7	LYS 2	SER 43
8	PRO 2	LYS 64
9	MET 1	GLN 36
A	U 3	C 2930
B	C 2	G 115
G	ALA 2	ARG 274
H	THR 2	LYS 207
I	LEU 4	LEU 206
J	ASN 2	PRO 176
K	ILE 9	GLU 173
M	ARG 2	LEU 143
N	MET 1	LEU 122
O	LEU 3	ILE 146
P	LEU 2	ARG 134
Q	TYR 3	VAL 135
R	ILE 2	PHE 119
S	ASN 2	ILE 113
T	PRO 2	LEU 117
U	MET 1	ASN 101
V	THR 6	VAL 115
W	ASP 2	PHE 91
X	MET 1	LYS 95
Z	SER 19	PRO 91

There are 83 helices in PDB entry 8A63. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	51	55	Right-handed alpha
Helix 2	AA2	2	4	9	Right-handed alpha
Helix 3	AA3	2	10	35	Right-handed alpha
Helix 4	AA4	2	41	61	Right-handed alpha
Helix 5	AA5	3	16	26	Right-handed alpha
Helix 6	AA6	3	40	50	Right-handed alpha
Helix 7	AA7	5	9	17	Right-handed alpha
Helix 8	AA8	7	8	17	Right-handed alpha
Helix 9	AA9	7	17	23	Right-handed alpha
Helix 10	AB1	7	24	38	Right-handed alpha
Helix 11	AB2	8	7	12	Right-handed alpha
Helix 12	AB3	8	37	46	Right-handed alpha
Helix 13	AB4	8	51	59	Right-handed alpha
Helix 14	AB5	8	60	63	Right-handed 310
Helix 15	AB6	9	29	32	Right-handed 310
Helix 16	AB7	G	30	32	Right-handed 310
Helix 17	AB8	G	197	203	Right-handed 310
Helix 18	AB9	G	207	214	Right-handed alpha
Helix 19	AC1	G	221	225	Right-handed 310
Helix 20	AC2	G	264	268	Right-handed 310
Helix 21	AC3	H	57	61	Right-handed 310
Helix 22	AC4	H	62	71	Right-handed alpha
Helix 23	AC5	H	98	102	Right-handed 310
Helix 24	AC6	H	121	127	Right-handed alpha
Helix 25	AC7	I	20	25	Right-handed alpha
Helix 26	AC8	I	29	44	Right-handed alpha
Helix 27	AC9	I	102	120	Right-handed alpha
Helix 28	AD1	I	135	147	Right-handed alpha
Helix 29	AD2	I	160	168	Right-handed alpha
Helix 30	AD3	I	182	189	Right-handed alpha
Helix 31	AD4	I	196	206	Right-handed alpha
Helix 32	AD5	J	3	12	Right-handed alpha
Helix 33	AD6	J	12	21	Right-handed alpha
Helix 34	AD7	J	24	28	Right-handed 310
Helix 35	AD8	J	41	46	Right-handed 310
Helix 36	AD9	J	47	62	Right-handed alpha
Helix 37	AE1	J	92	106	Right-handed alpha
Helix 38	AE2	J	107	111	Right-handed 310
Helix 39	AE3	J	118	122	Right-handed 310
Helix 40	AE4	J	162	174	Right-handed alpha
Helix 41	AE5	K	58	81	Right-handed alpha
Helix 42	AE6	K	137	150	Right-handed alpha
Helix 43	AE7	M	25	39	Right-handed alpha
Helix 44	AE8	M	59	63	Right-handed 310
Helix 45	AE9	M	68	73	Right-handed alpha
Helix 46	AF1	M	90	97	Right-handed alpha
Helix 47	AF2	M	97	108	Right-handed alpha
Helix 48	AF3	M	113	121	Right-handed alpha
Helix 49	AF4	M	133	137	Right-handed 310
Helix 50	AF5	N	104	110	Right-handed alpha
Helix 51	AF6	N	111	118	Right-handed alpha
Helix 52	AF7	O	22	26	Right-handed 310
Helix 53	AF8	O	37	41	Right-handed 310
Helix 54	AF9	O	56	61	Right-handed alpha
Helix 55	AG1	O	80	85	Right-handed 310
Helix 56	AG2	O	92	99	Right-handed alpha
Helix 57	AG3	O	129	140	Right-handed alpha
Helix 58	AG4	P	44	59	Right-handed alpha
Helix 59	AG5	P	110	123	Right-handed alpha
Helix 60	AG6	Q	9	28	Right-handed alpha
Helix 61	AG7	Q	34	54	Right-handed alpha
Helix 62	AG8	Q	55	64	Right-handed alpha
Helix 63	AG9	Q	94	101	Right-handed alpha
Helix 64	AH1	Q	101	106	Right-handed alpha
Helix 65	AH2	R	6	20	Right-handed alpha
Helix 66	AH3	R	68	88	Right-handed alpha
Helix 67	AH4	R	103	115	Right-handed alpha
Helix 68	AH5	S	3	10	Right-handed alpha
Helix 69	AH6	S	11	13	Right-handed 310
Helix 70	AH7	S	53	56	Right-handed 310
Helix 71	AH8	S	97	102	Right-handed 310
Helix 72	AH9	T	8	21	Right-handed alpha
Helix 73	AI1	T	25	30	Right-handed 310
Helix 74	AI2	T	31	71	Right-handed alpha
Helix 75	AI3	T	75	87	Right-handed alpha
Helix 76	AI4	T	91	102	Right-handed alpha
Helix 77	AI5	T	102	117	Right-handed alpha
Helix 78	AI6	V	18	30	Right-handed alpha
Helix 79	AI7	V	33	43	Right-handed alpha
Helix 80	AI8	V	47	66	Right-handed alpha
Helix 81	AI9	V	70	74	Right-handed 310
Helix 82	AJ1	W	13	19	Right-handed alpha
Helix 83	AJ2	W	34	47	Right-handed alpha

There are 47 sheets in PDB entry 8A63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	13	18	first strand
Strand 2	1	24	29	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	33	38	first strand
Strand 2	1	45	50	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	34	37	first strand
Strand 2	3	4	8	anti-parallel
Strand 3	3	54	57	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	22	24	first strand
Strand 2	4	13	16	anti-parallel
Strand 3	4	45	48	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	27	29	first strand
Strand 2	5	36	38	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	17	21	first strand
Strand 2	6	3	9	anti-parallel
Strand 3	6	41	47	anti-parallel
Strand 4	6	31	36	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	8	15	16	first strand
Strand 2	8	22	24	anti-parallel
Strand 3	8	48	49	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	9	2	3	first strand
Strand 2	9	34	35	parallel
Strand 3	9	22	26	anti-parallel
Strand 4	9	15	19	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	5	first strand
Strand 2	G	17	19	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	34	37	first strand
Strand 2	G	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	105	first strand
Strand 2	G	91	96	anti-parallel
Strand 3	G	76	82	anti-parallel
Strand 4	G	115	116	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	129	131	first strand
Strand 2	G	189	192	anti-parallel
Strand 3	G	140	142	anti-parallel
Strand 4	G	162	168	anti-parallel
Strand 5	G	171	175	anti-parallel
Strand 6	G	181	185	anti-parallel
Strand 7	G	270	272	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	247	248	first strand
Strand 2	G	251	253	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	16	first strand
Strand 2	H	22	29	anti-parallel
Strand 3	H	185	189	anti-parallel
Strand 4	H	168	180	anti-parallel
Strand 5	H	107	113	anti-parallel
Strand 6	H	199	204	anti-parallel
Strand 7	H	4	16	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	39	first strand
Strand 2	H	48	52	anti-parallel
Strand 3	H	80	83	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	119	120	first strand
Strand 2	H	162	163	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	16	first strand
Strand 2	I	5	7	anti-parallel
Strand 3	I	123	126	parallel
Strand 4	I	191	195	parallel
Strand 5	I	152	155	parallel
Strand 6	I	173	176	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	70	first strand
Strand 2	J	82	91	anti-parallel
Strand 3	J	31	37	anti-parallel
Strand 4	J	152	158	anti-parallel
Strand 5	J	128	132	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	16	20	first strand
Strand 2	K	23	27	anti-parallel
Strand 3	K	32	35	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	45	first strand
Strand 2	K	50	53	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	121	122	first strand
Strand 2	K	130	135	anti-parallel
Strand 3	K	83	90	anti-parallel
Strand 4	K	161	164	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	95	99	first strand
Strand 2	K	102	106	anti-parallel
Strand 3	K	113	116	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	123	125	first strand
Strand 2	M	54	58	parallel
Strand 3	M	16	20	parallel
Strand 4	M	139	140	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	74	78	first strand
Strand 2	M	85	89	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	7	10	first strand
Strand 2	N	16	24	anti-parallel
Strand 3	N	38	46	anti-parallel
Strand 4	N	57	64	anti-parallel
Strand 5	N	83	87	anti-parallel
Strand 6	N	7	10	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	69	70	first strand
Strand 2	N	76	79	anti-parallel
Strand 3	S	68	75	anti-parallel
Strand 4	S	58	65	anti-parallel
Strand 5	S	37	51	anti-parallel
Strand 6	S	25	34	anti-parallel
Strand 7	S	81	88	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	102	103	first strand
Strand 2	N	121	122	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	75	78	first strand
Strand 2	O	109	112	parallel
Strand 3	O	127	128	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	89	91	first strand
Strand 2	O	121	125	parallel
Strand 3	O	144	145	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	63	66	first strand
Strand 2	P	102	107	anti-parallel
Strand 3	P	32	36	anti-parallel
Strand 4	P	129	133	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	40	43	first strand
Strand 2	P	89	97	anti-parallel
Strand 3	P	72	76	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	29	33	first strand
Strand 2	Q	128	134	anti-parallel
Strand 3	Q	114	121	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	70	73	first strand
Strand 2	Q	91	93	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	51	57	first strand
Strand 2	R	40	46	anti-parallel
Strand 3	R	30	35	anti-parallel
Strand 4	R	93	95	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	90	91	first strand
Strand 2	S	111	112	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	10	14	first strand
Strand 2	U	3	7	anti-parallel
Strand 3	U	38	41	anti-parallel
Strand 4	U	47	48	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	19	22	first strand
Strand 2	U	91	101	anti-parallel
Strand 3	U	57	67	anti-parallel
Strand 4	U	32	35	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	71	77	first strand
Strand 2	U	82	88	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	7	15	first strand
Strand 2	V	106	113	anti-parallel
Strand 3	V	75	83	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	87	92	first strand
Strand 2	V	98	103	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	7	10	first strand
Strand 2	W	24	29	anti-parallel
Strand 3	W	75	82	anti-parallel
Strand 4	W	50	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	62	64	first strand
Strand 2	W	69	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	63	64	first strand
Strand 2	X	32	35	anti-parallel
Strand 3	X	20	27	anti-parallel
Strand 4	X	8	11	anti-parallel
Strand 5	X	68	71	anti-parallel
Strand 6	X	78	79	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	40	45	first strand
Strand 2	X	55	60	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	81	85	first strand
Strand 2	X	90	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	30	31	first strand
Strand 2	Z	44	47	anti-parallel
Strand 3	Z	67	69	anti-parallel
Strand 4	Z	59	61	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	38	39	first strand
Strand 2	Z	73	79	anti-parallel
Strand 3	Z	85	90	anti-parallel
Strand 4	Z	54	55	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8A63

Analysis of interatomic Contacts of Structural Units in PDB entry:
8A63