Analysis of interatomic Contacts of Structural Units in PDB entry:
8A6T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8A6T entry

There are 6 chains in PDB entry 8A6T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 571
B	MET 1	GLY 630
C	ASP 11	SER 161
D	MET 1	TYR 571
E	MET 1	GLY 630
F	ASP 11	SER 161

There are141 helices in PDB entry 8A6T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	26	Right-handed alpha
Helix 2	AA2	A	27	29	Right-handed 310
Helix 3	AA3	A	77	93	Right-handed alpha
Helix 4	AA4	A	108	117	Right-handed alpha
Helix 5	AA5	A	143	146	Right-handed 310
Helix 6	AA6	A	150	159	Right-handed alpha
Helix 7	AA7	A	170	174	Right-handed 310
Helix 8	AA8	A	178	182	Right-handed 310
Helix 9	AA9	A	193	199	Right-handed alpha
Helix 10	AB1	A	209	218	Right-handed alpha
Helix 11	AB2	A	235	241	Right-handed 310
Helix 12	AB3	A	248	259	Right-handed alpha
Helix 13	AB4	A	267	289	Right-handed alpha
Helix 14	AB5	A	299	310	Right-handed alpha
Helix 15	AB6	A	311	317	Right-handed 310
Helix 16	AB7	A	322	334	Right-handed alpha
Helix 17	AB8	A	334	340	Right-handed alpha
Helix 18	AB9	A	342	344	Right-handed 310
Helix 19	AC1	A	355	361	Right-handed alpha
Helix 20	AC2	A	362	367	Right-handed 310
Helix 21	AC3	A	375	387	Right-handed alpha
Helix 22	AC4	A	416	432	Right-handed alpha
Helix 23	AC5	A	436	441	Right-handed 310
Helix 24	AC6	A	442	446	Right-handed 310
Helix 25	AC7	A	470	483	Right-handed alpha
Helix 26	AC8	A	499	503	Right-handed 310
Helix 27	AC9	A	513	528	Right-handed alpha
Helix 28	AD1	A	537	547	Right-handed alpha
Helix 29	AD2	A	553	560	Right-handed alpha
Helix 30	AD3	B	6	23	Right-handed alpha
Helix 31	AD4	B	33	38	Right-handed alpha
Helix 32	AD5	B	40	55	Right-handed alpha
Helix 33	AD6	B	65	71	Right-handed 310
Helix 34	AD7	B	105	107	Right-handed 310
Helix 35	AD8	B	108	116	Right-handed alpha
Helix 36	AD9	B	123	127	Right-handed 310
Helix 37	AE1	B	143	148	Right-handed alpha
Helix 38	AE2	B	152	156	Right-handed 310
Helix 39	AE3	B	164	171	Right-handed alpha
Helix 40	AE4	B	175	181	Right-handed alpha
Helix 41	AE5	B	184	195	Right-handed alpha
Helix 42	AE6	B	206	216	Right-handed alpha
Helix 43	AE7	B	236	245	Right-handed alpha
Helix 44	AE8	B	245	261	Right-handed alpha
Helix 45	AE9	B	273	291	Right-handed alpha
Helix 46	AF1	B	296	300	Right-handed 310
Helix 47	AF2	B	314	318	Right-handed 310
Helix 48	AF3	B	319	329	Right-handed alpha
Helix 49	AF4	B	356	361	Right-handed alpha
Helix 50	AF5	B	361	369	Right-handed alpha
Helix 51	AF6	B	369	374	Right-handed alpha
Helix 52	AF7	B	406	412	Right-handed alpha
Helix 53	AF8	B	418	422	Right-handed 310
Helix 54	AF9	B	431	434	Right-handed 310
Helix 55	AG1	B	440	442	Right-handed 310
Helix 56	AG2	B	447	454	Right-handed alpha
Helix 57	AG3	B	471	486	Right-handed alpha
Helix 58	AG4	B	491	510	Right-handed alpha
Helix 59	AG5	B	516	532	Right-handed alpha
Helix 60	AG6	B	534	539	Right-handed alpha
Helix 61	AG7	B	541	551	Right-handed alpha
Helix 62	AG8	B	551	561	Right-handed alpha
Helix 63	AG9	B	569	573	Right-handed 310
Helix 64	AH1	B	586	592	Right-handed alpha
Helix 65	AH2	B	616	622	Right-handed alpha
Helix 66	AH3	C	12	21	Right-handed alpha
Helix 67	AH4	C	30	43	Right-handed alpha
Helix 68	AH5	C	46	58	Right-handed alpha
Helix 69	AH6	C	60	71	Right-handed alpha
Helix 70	AH7	C	96	109	Right-handed alpha
Helix 71	AH8	C	151	161	Right-handed alpha
Helix 72	AH9	D	20	26	Right-handed alpha
Helix 73	AI1	D	27	29	Right-handed 310
Helix 74	AI2	D	77	93	Right-handed alpha
Helix 75	AI3	D	108	117	Right-handed alpha
Helix 76	AI4	D	143	146	Right-handed 310
Helix 77	AI5	D	150	159	Right-handed alpha
Helix 78	AI6	D	170	174	Right-handed 310
Helix 79	AI7	D	178	182	Right-handed 310
Helix 80	AI8	D	193	199	Right-handed alpha
Helix 81	AI9	D	209	218	Right-handed alpha
Helix 82	AJ1	D	236	241	Right-handed 310
Helix 83	AJ2	D	248	259	Right-handed alpha
Helix 84	AJ3	D	267	289	Right-handed alpha
Helix 85	AJ4	D	299	310	Right-handed alpha
Helix 86	AJ5	D	311	317	Right-handed 310
Helix 87	AJ6	D	322	334	Right-handed alpha
Helix 88	AJ7	D	334	340	Right-handed alpha
Helix 89	AJ8	D	342	344	Right-handed 310
Helix 90	AJ9	D	355	361	Right-handed alpha
Helix 91	AK1	D	362	367	Right-handed 310
Helix 92	AK2	D	375	387	Right-handed alpha
Helix 93	AK3	D	416	432	Right-handed alpha
Helix 94	AK4	D	436	441	Right-handed 310
Helix 95	AK5	D	442	446	Right-handed 310
Helix 96	AK6	D	470	483	Right-handed alpha
Helix 97	AK7	D	499	503	Right-handed 310
Helix 98	AK8	D	513	528	Right-handed alpha
Helix 99	AK9	D	537	547	Right-handed alpha
Helix 100	AL1	D	553	560	Right-handed alpha
Helix 101	AL2	E	6	23	Right-handed alpha
Helix 102	AL3	E	33	38	Right-handed alpha
Helix 103	AL4	E	40	55	Right-handed alpha
Helix 104	AL5	E	66	71	Right-handed 310
Helix 105	AL6	E	105	107	Right-handed 310
Helix 106	AL7	E	108	116	Right-handed alpha
Helix 107	AL8	E	123	127	Right-handed 310
Helix 108	AL9	E	143	148	Right-handed alpha
Helix 109	AM1	E	164	171	Right-handed alpha
Helix 110	AM2	E	175	181	Right-handed alpha
Helix 111	AM3	E	184	195	Right-handed alpha
Helix 112	AM4	E	206	216	Right-handed alpha
Helix 113	AM5	E	236	245	Right-handed alpha
Helix 114	AM6	E	245	261	Right-handed alpha
Helix 115	AM7	E	273	291	Right-handed alpha
Helix 116	AM8	E	296	300	Right-handed 310
Helix 117	AM9	E	314	318	Right-handed 310
Helix 118	AN1	E	319	329	Right-handed alpha
Helix 119	AN2	E	356	361	Right-handed alpha
Helix 120	AN3	E	361	369	Right-handed alpha
Helix 121	AN4	E	369	374	Right-handed alpha
Helix 122	AN5	E	406	412	Right-handed alpha
Helix 123	AN6	E	418	422	Right-handed 310
Helix 124	AN7	E	431	434	Right-handed 310
Helix 125	AN8	E	440	442	Right-handed 310
Helix 126	AN9	E	447	454	Right-handed alpha
Helix 127	AO1	E	471	487	Right-handed alpha
Helix 128	AO2	E	491	510	Right-handed alpha
Helix 129	AO3	E	516	532	Right-handed alpha
Helix 130	AO4	E	534	539	Right-handed alpha
Helix 131	AO5	E	541	551	Right-handed alpha
Helix 132	AO6	E	551	561	Right-handed alpha
Helix 133	AO7	E	569	573	Right-handed 310
Helix 134	AO8	E	586	592	Right-handed alpha
Helix 135	AO9	E	616	622	Right-handed alpha
Helix 136	AP1	F	12	21	Right-handed alpha
Helix 137	AP2	F	30	43	Right-handed alpha
Helix 138	AP3	F	46	58	Right-handed alpha
Helix 139	AP4	F	60	71	Right-handed alpha
Helix 140	AP5	F	96	109	Right-handed alpha
Helix 141	AP6	F	151	161	Right-handed alpha

There are 26 sheets in PDB entry 8A6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	16	first strand
Strand 2	A	3	8	anti-parallel
Strand 3	A	72	74	parallel
Strand 4	A	51	54	anti-parallel
Strand 5	A	59	61	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	141	first strand
Strand 2	A	204	206	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	168	first strand
Strand 2	A	175	177	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	266	first strand
Strand 2	A	223	228	parallel
Strand 3	A	346	351	parallel
Strand 4	A	372	374	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	295	first strand
Strand 2	A	490	494	parallel
Strand 3	A	461	469	parallel
Strand 4	A	451	458	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	80	first strand
Strand 2	B	26	31	parallel
Strand 3	B	91	95	anti-parallel
Strand 4	B	99	102	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	136	137	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	311	first strand
Strand 2	B	264	270	parallel
Strand 3	B	223	228	parallel
Strand 4	B	351	355	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	378	first strand
Strand 2	B	381	382	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	402	first strand
Strand 2	B	384	391	anti-parallel
Strand 3	B	462	467	parallel
Strand 4	B	424	429	anti-parallel
Strand 5	B	435	438	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	574	576	first strand
Strand 2	B	628	630	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	597	598	first strand
Strand 2	B	606	607	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	123	first strand
Strand 2	C	82	86	parallel
Strand 3	C	138	140	anti-parallel
Strand 4	C	143	144	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	16	first strand
Strand 2	D	3	8	anti-parallel
Strand 3	D	71	74	parallel
Strand 4	D	51	54	anti-parallel
Strand 5	D	59	61	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	141	first strand
Strand 2	D	204	206	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	168	first strand
Strand 2	D	175	177	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	266	first strand
Strand 2	D	223	228	parallel
Strand 3	D	346	351	parallel
Strand 4	D	372	374	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	294	295	first strand
Strand 2	D	490	494	parallel
Strand 3	D	461	469	parallel
Strand 4	D	451	458	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	80	first strand
Strand 2	E	26	31	parallel
Strand 3	E	91	95	anti-parallel
Strand 4	E	99	102	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	129	first strand
Strand 2	E	136	137	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	305	311	first strand
Strand 2	E	264	270	parallel
Strand 3	E	223	228	parallel
Strand 4	E	351	355	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	377	378	first strand
Strand 2	E	381	382	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	397	402	first strand
Strand 2	E	384	391	anti-parallel
Strand 3	E	462	467	parallel
Strand 4	E	424	429	anti-parallel
Strand 5	E	435	438	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	574	576	first strand
Strand 2	E	628	630	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	597	598	first strand
Strand 2	E	606	607	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	121	122	first strand
Strand 2	F	82	86	parallel
Strand 3	F	138	140	anti-parallel
Strand 4	F	143	144	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8A6T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8A6T