Analysis of interatomic Contacts of Structural Units in PDB entry:
8A7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A7H entry

There are 2 chains in PDB entry 8A7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 362
B
 MET 1LEU 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8A7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 13Right-handed alpha
Helix 2
AA2
A
34 42Right-handed alpha
Helix 3
AA3
A
44 49Right-handed alpha
Helix 4
AA4
A
52 58Right-handed 310
Helix 5
AA5
A
63 76Right-handed alpha
Helix 6
AA6
A
119 176Right-handed alpha
Helix 7
AA7
A
181 211Right-handed alpha
Helix 8
AA8
A
222 234Right-handed alpha
Helix 9
AA9
A
235 240Right-handed alpha
Helix 10
AB1
A
258 277Right-handed alpha
Helix 11
AB2
A
312 316Right-handed 310
Helix 12
AB3
A
330 342Right-handed alpha
Helix 13
AB4
B
4 13Right-handed alpha
Helix 14
AB5
B
34 42Right-handed alpha
Helix 15
AB6
B
44 49Right-handed alpha
Helix 16
AB7
B
52 58Right-handed 310
Helix 17
AB8
B
63 76Right-handed alpha
Helix 18
AB9
B
119 175Right-handed alpha
Helix 19
AC1
B
181 211Right-handed alpha
Helix 20
AC2
B
221 234Right-handed alpha
Helix 21
AC3
B
235 238Right-handed 310
Helix 22
AC4
B
258 277Right-handed alpha
Helix 23
AC5
B
312 316Right-handed 310
Helix 24
AC6
B
330 342Right-handed alpha
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There are 5 sheets in PDB entry 8A7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
109 118anti-parallel
Strand 4
A
92 104anti-parallel
Strand 5
A
79 86anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 221first strand
Strand 2
A
254 257anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 247first strand
Strand 2
A
284 293parallel
Strand 3
A
296 303anti-parallel
Strand 4
A
356 362anti-parallel
Strand 5
A
347 349anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 33first strand
Strand 2
B
17 24anti-parallel
Strand 3
B
109 118anti-parallel
Strand 4
B
92 104anti-parallel
Strand 5
B
79 86anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 247first strand
Strand 2
B
284 293parallel
Strand 3
B
296 303anti-parallel
Strand 4
B
356 362anti-parallel
Strand 5
B
346 349anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il