Analysis of interatomic Contacts of Structural Units in PDB entry:
8A93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A93 entry

There are 7 chains in PDB entry 8A93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 341
B
 MET 1PRO 341
C
 GLU 37ILE 49
D
 PRO 4GLU 47
F
 SER 78ALA 167
X
 G 1 C 21
Y
 G 5 G 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8A93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 47Right-handed alpha
Helix 2
AA2
A
54 58Right-handed 310
Helix 3
AA3
A
100 107Right-handed 310
Helix 4
AA4
A
114 122Right-handed alpha
Helix 5
AA5
A
124 138Right-handed alpha
Helix 6
AA6
A
141 163Right-handed alpha
Helix 7
AA7
A
168 202Right-handed alpha
Helix 8
AA8
A
220 227Right-handed alpha
Helix 9
AA9
A
228 236Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
261 285Right-handed alpha
Helix 12
AB3
A
300 312Right-handed alpha
Helix 13
AB4
B
35 47Right-handed alpha
Helix 14
AB5
B
100 105Right-handed alpha
Helix 15
AB6
B
114 117Right-handed 310
Helix 16
AB7
B
118 123Right-handed alpha
Helix 17
AB8
B
124 138Right-handed alpha
Helix 18
AB9
B
141 163Right-handed alpha
Helix 19
AC1
B
169 205Right-handed alpha
Helix 20
AC2
B
220 227Right-handed alpha
Helix 21
AC3
B
228 236Right-handed alpha
Helix 22
AC4
B
241 245Right-handed 310
Helix 23
AC5
B
256 260Right-handed alpha
Helix 24
AC6
B
261 285Right-handed alpha
Helix 25
AC7
B
300 312Right-handed alpha
Helix 26
AC8
C
38 49Right-handed alpha
Helix 27
AC9
D
6 17Right-handed alpha
Helix 28
AD1
D
21 34Right-handed alpha
Helix 29
AD2
D
35 47Right-handed alpha
Helix 30
AD3
F
85 96Right-handed alpha
Helix 31
AD4
F
121 126Right-handed alpha
Helix 32
AD5
F
127 129Right-handed 310
Helix 33
AD6
F
142 160Right-handed alpha
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There are 8 sheets in PDB entry 8A93. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
66 73anti-parallel
Strand 3
A
78 85anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
289 293parallel
Strand 3
A
317 321parallel
Strand 4
A
25 29parallel
Strand 5
A
331 334parallel
Strand 6
A
337 339anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
97 99anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 214first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
254 255anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 9first strand
Strand 2
B
66 73anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
93 94anti-parallel
Strand 5
B
97 98anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 113first strand
Strand 2
B
289 293parallel
Strand 3
B
316 321parallel
Strand 4
B
24 29parallel
Strand 5
B
331 334parallel
Strand 6
B
337 339anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 214first strand
Strand 2
B
246 251anti-parallel
Strand 3
B
254 255anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
101 104first strand
Strand 2
F
80 83parallel
Strand 3
F
135 137parallel
Strand 4
F
163 164parallel
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