Analysis of interatomic Contacts of Structural Units in PDB entry:
8A9B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8A9B entry

There is 1 chain in PDB entry 8A9B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 60ASP 868
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8A9B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
95 106Right-handed alpha
Helix 2
AA2
B
109 125Right-handed alpha
Helix 3
AA3
B
251 256Right-handed alpha
Helix 4
AA4
B
261 266Right-handed alpha
Helix 5
AA5
B
268 297Right-handed alpha
Helix 6
AA6
B
297 304Right-handed alpha
Helix 7
AA7
B
311 316Right-handed alpha
Helix 8
AA8
B
319 331Right-handed alpha
Helix 9
AA9
B
334 344Right-handed alpha
Helix 10
AB1
B
353 360Right-handed alpha
Helix 11
AB2
B
362 370Right-handed alpha
Helix 12
AB3
B
376 381Right-handed alpha
Helix 13
AB4
B
383 389Right-handed alpha
Helix 14
AB5
B
396 414Right-handed alpha
Helix 15
AB6
B
421 431Right-handed alpha
Helix 16
AB7
B
446 462Right-handed alpha
Helix 17
AB8
B
465 477Right-handed alpha
Helix 18
AB9
B
482 486Right-handed 310
Helix 19
AC1
B
489 499Right-handed alpha
Helix 20
AC2
B
515 525Right-handed alpha
Helix 21
AC3
B
532 539Right-handed alpha
Helix 22
AC4
B
552 557Right-handed alpha
Helix 23
AC5
B
565 582Right-handed alpha
Helix 24
AC6
B
587 592Right-handed alpha
Helix 25
AC7
B
635 643Right-handed alpha
Helix 26
AC8
B
649 659Right-handed alpha
Helix 27
AC9
B
663 674Right-handed alpha
Helix 28
AD1
B
685 689Right-handed 310
Helix 29
AD2
B
692 700Right-handed alpha
Helix 30
AD3
B
706 717Right-handed alpha
Helix 31
AD4
B
797 816Right-handed alpha
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There are 6 sheets in PDB entry 8A9B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 137first strand
Strand 2
B
157 160anti-parallel
Strand 3
B
184 187anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 142first strand
Strand 2
B
154 155anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
218 219anti-parallel
Strand 3
B
222 223anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
607 609first strand
Strand 2
B
614 620anti-parallel
Strand 3
B
735 748anti-parallel
Strand 4
B
623 626anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
607 609first strand
Strand 2
B
614 620anti-parallel
Strand 3
B
735 748anti-parallel
Strand 4
B
761 771anti-parallel
Strand 5
B
821 829anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
630 632first strand
Strand 2
B
730 732anti-parallel
Strand 3
B
778 779anti-parallel
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