Analysis of interatomic Contacts of Structural Units in PDB entry:
8AB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AB5 entry

There are 4 chains in PDB entry 8AB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 93LEU 270
B
 ALA 93LEU 270
C
 VAL 2HIS 4
D
 VAL 2HIS 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8AB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 115Right-handed alpha
Helix 2
AA2
A
115 124Right-handed alpha
Helix 3
AA3
A
128 132Right-handed 310
Helix 4
AA4
A
136 141Right-handed alpha
Helix 5
AA5
A
142 144Right-handed 310
Helix 6
AA6
A
147 170Right-handed alpha
Helix 7
AA7
A
170 194Right-handed alpha
Helix 8
AA8
A
200 218Right-handed alpha
Helix 9
AA9
A
219 222Right-handed 310
Helix 10
AB1
A
226 242Right-handed alpha
Helix 11
AB2
A
250 269Right-handed alpha
Helix 12
AB3
B
94 115Right-handed alpha
Helix 13
AB4
B
115 124Right-handed alpha
Helix 14
AB5
B
128 132Right-handed 310
Helix 15
AB6
B
136 141Right-handed alpha
Helix 16
AB7
B
142 144Right-handed 310
Helix 17
AB8
B
147 170Right-handed alpha
Helix 18
AB9
B
170 194Right-handed alpha
Helix 19
AC1
B
200 218Right-handed alpha
Helix 20
AC2
B
219 222Right-handed 310
Helix 21
AC3
B
226 243Right-handed alpha
Helix 22
AC4
B
244 247Right-handed 310
Helix 23
AC5
B
250 270Right-handed alpha
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There are no sheets in PDB entry 8AB5
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