Analysis of interatomic Contacts of Structural Units in PDB entry:
8ABQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ABQ entry

There are 4 chains in PDB entry 8ABQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 306SER 522
C
 ASP 206ASN 404
B
 ILE 307SER 522
D
 ASP 206ASN 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8ABQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
306 357Right-handed alpha
Helix 2
AA2
A
361 390Right-handed alpha
Helix 3
AA3
A
392 398Right-handed alpha
Helix 4
AA4
A
398 438Right-handed alpha
Helix 5
AA5
A
445 512Right-handed alpha
Helix 6
AA6
A
514 520Right-handed alpha
Helix 7
AA7
C
207 253Right-handed alpha
Helix 8
AA8
C
254 258Right-handed 310
Helix 9
AA9
C
259 291Right-handed alpha
Helix 10
AB1
C
291 324Right-handed alpha
Helix 11
AB2
C
344 403Right-handed alpha
Helix 12
AB3
B
308 357Right-handed alpha
Helix 13
AB4
B
360 392Right-handed alpha
Helix 14
AB5
B
392 436Right-handed alpha
Helix 15
AB6
B
437 439Right-handed 310
Helix 16
AB7
B
442 520Right-handed alpha
Helix 17
AB8
D
207 253Right-handed alpha
Helix 18
AB9
D
259 291Right-handed alpha
Helix 19
AC1
D
291 324Right-handed alpha
Helix 20
AC2
D
346 398Right-handed alpha
Helix 21
AC3
D
399 401Right-handed 310
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There are no sheets in PDB entry 8ABQ
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