Analysis of interatomic Contacts of Structural Units in PDB entry:
8ABV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ABV entry

There is 1 chain in PDB entry 8ABV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1ALA 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8ABV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 37Right-handed alpha
Helix 2
AA2
A
39 45Right-handed alpha
Helix 3
AA3
A
62 71Right-handed alpha
Helix 4
AA4
A
73 80Right-handed alpha
Helix 5
AA5
A
123 129Right-handed 310
Helix 6
AA6
A
172 176Right-handed 310
Helix 7
AA7
A
199 203Right-handed 310
Helix 8
AA8
A
222 226Right-handed 310
Helix 9
AA9
A
227 235Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8ABV.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 102first strand
Strand 2
A
108 121anti-parallel
Strand 3
A
136 150anti-parallel
Strand 4
A
153 168anti-parallel
Strand 5
A
47 55parallel
Strand 6
A
58 61anti-parallel
Strand 7
A
196 197anti-parallel
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