Analysis of interatomic Contacts of Structural Units in PDB entry:
8ABX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ABX entry

There is 1 chain in PDB entry 8ABX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3LEU 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8ABX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
33 35Right-handed 310
Helix 3
AA3
A
36 45Right-handed alpha
Helix 4
AA4
A
45 52Right-handed alpha
Helix 5
AA5
A
54 61Right-handed alpha
Helix 6
AA6
A
66 70Right-handed 310
Helix 7
AA7
A
72 93Right-handed alpha
Helix 8
AA8
A
104 119Right-handed alpha
Helix 9
AA9
A
125 130Right-handed alpha
Helix 10
AB1
A
144 146Right-handed 310
Helix 11
AB2
A
159 176Right-handed alpha
Helix 12
AB3
A
177 179Right-handed 310
Helix 13
AB4
A
180 190Right-handed alpha
Helix 14
AB5
A
192 215Right-handed alpha
Helix 15
AB6
A
216 221Right-handed alpha
Helix 16
AB7
A
222 229Right-handed alpha
Helix 17
AB8
A
229 235Right-handed alpha
Helix 18
AB9
A
240 244Right-handed 310
Helix 19
AC1
A
267 277Right-handed alpha
Helix 20
AC2
A
289 297Right-handed alpha
Helix 21
AC3
A
300 312Right-handed alpha
Helix 22
AC4
A
315 324Right-handed alpha
Helix 23
AC5
A
325 354Right-handed alpha
Helix 24
AC6
A
354 360Right-handed alpha
Helix 25
AC7
A
384 397Right-handed alpha
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There are 2 sheets in PDB entry 8ABX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
248 249parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
148 149anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il