Analysis of interatomic Contacts of Structural Units in PDB entry:
8ACS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ACS entry

There are 4 chains in PDB entry 8ACS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 5	SER 602
B	ASN 6	SER 602
C	ASN 6	SER 602
D	ASN 6	SER 602

There are 89 helices in PDB entry 8ACS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	25	Right-handed alpha
Helix 2	AA2	A	27	34	Right-handed alpha
Helix 3	AA3	A	56	72	Right-handed alpha
Helix 4	AA4	A	132	136	Right-handed 310
Helix 5	AA5	A	150	162	Right-handed alpha
Helix 6	AA6	A	176	189	Right-handed alpha
Helix 7	AA7	A	203	208	Right-handed alpha
Helix 8	AA8	A	218	222	Right-handed 310
Helix 9	AA9	A	238	253	Right-handed alpha
Helix 10	AB1	A	322	324	Right-handed 310
Helix 11	AB2	A	326	331	Right-handed 310
Helix 12	AB3	A	341	354	Right-handed alpha
Helix 13	AB4	A	371	378	Right-handed alpha
Helix 14	AB5	A	384	390	Right-handed alpha
Helix 15	AB6	A	393	403	Right-handed alpha
Helix 16	AB7	A	405	424	Right-handed alpha
Helix 17	AB8	A	424	434	Right-handed alpha
Helix 18	AB9	A	446	455	Right-handed alpha
Helix 19	AC1	A	463	470	Right-handed alpha
Helix 20	AC2	A	511	519	Right-handed alpha
Helix 21	AC3	A	520	528	Right-handed alpha
Helix 22	AC4	A	566	586	Right-handed alpha
Helix 23	AC5	B	7	25	Right-handed alpha
Helix 24	AC6	B	27	34	Right-handed alpha
Helix 25	AC7	B	56	68	Right-handed alpha
Helix 26	AC8	B	69	71	Right-handed 310
Helix 27	AC9	B	132	136	Right-handed 310
Helix 28	AD1	B	150	162	Right-handed alpha
Helix 29	AD2	B	176	189	Right-handed alpha
Helix 30	AD3	B	203	208	Right-handed alpha
Helix 31	AD4	B	218	223	Right-handed alpha
Helix 32	AD5	B	238	253	Right-handed alpha
Helix 33	AD6	B	322	324	Right-handed 310
Helix 34	AD7	B	327	331	Right-handed 310
Helix 35	AD8	B	341	354	Right-handed alpha
Helix 36	AD9	B	371	378	Right-handed alpha
Helix 37	AE1	B	384	390	Right-handed alpha
Helix 38	AE2	B	393	403	Right-handed alpha
Helix 39	AE3	B	405	424	Right-handed alpha
Helix 40	AE4	B	424	434	Right-handed alpha
Helix 41	AE5	B	445	455	Right-handed alpha
Helix 42	AE6	B	463	470	Right-handed alpha
Helix 43	AE7	B	511	519	Right-handed alpha
Helix 44	AE8	B	520	528	Right-handed alpha
Helix 45	AE9	B	566	586	Right-handed alpha
Helix 46	AF1	C	7	25	Right-handed alpha
Helix 47	AF2	C	27	34	Right-handed alpha
Helix 48	AF3	C	56	72	Right-handed alpha
Helix 49	AF4	C	132	136	Right-handed 310
Helix 50	AF5	C	150	162	Right-handed alpha
Helix 51	AF6	C	176	189	Right-handed alpha
Helix 52	AF7	C	203	208	Right-handed alpha
Helix 53	AF8	C	218	223	Right-handed alpha
Helix 54	AF9	C	238	253	Right-handed alpha
Helix 55	AG1	C	322	324	Right-handed 310
Helix 56	AG2	C	327	331	Right-handed 310
Helix 57	AG3	C	341	354	Right-handed alpha
Helix 58	AG4	C	371	378	Right-handed alpha
Helix 59	AG5	C	384	390	Right-handed alpha
Helix 60	AG6	C	393	403	Right-handed alpha
Helix 61	AG7	C	405	424	Right-handed alpha
Helix 62	AG8	C	424	434	Right-handed alpha
Helix 63	AG9	C	446	455	Right-handed alpha
Helix 64	AH1	C	463	470	Right-handed alpha
Helix 65	AH2	C	511	519	Right-handed alpha
Helix 66	AH3	C	520	528	Right-handed alpha
Helix 67	AH4	C	566	586	Right-handed alpha
Helix 68	AH5	D	7	25	Right-handed alpha
Helix 69	AH6	D	27	34	Right-handed alpha
Helix 70	AH7	D	56	72	Right-handed alpha
Helix 71	AH8	D	132	136	Right-handed 310
Helix 72	AH9	D	150	162	Right-handed alpha
Helix 73	AI1	D	176	189	Right-handed alpha
Helix 74	AI2	D	203	208	Right-handed alpha
Helix 75	AI3	D	218	222	Right-handed 310
Helix 76	AI4	D	238	253	Right-handed alpha
Helix 77	AI5	D	322	324	Right-handed 310
Helix 78	AI6	D	327	331	Right-handed 310
Helix 79	AI7	D	341	354	Right-handed alpha
Helix 80	AI8	D	371	378	Right-handed alpha
Helix 81	AI9	D	384	390	Right-handed alpha
Helix 82	AJ1	D	393	403	Right-handed alpha
Helix 83	AJ2	D	405	424	Right-handed alpha
Helix 84	AJ3	D	424	434	Right-handed alpha
Helix 85	AJ4	D	446	455	Right-handed alpha
Helix 86	AJ5	D	463	470	Right-handed alpha
Helix 87	AJ6	D	511	519	Right-handed alpha
Helix 88	AJ7	D	520	528	Right-handed alpha
Helix 89	AJ8	D	566	586	Right-handed alpha

There are 28 sheets in PDB entry 8ACS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	55	first strand
Strand 2	A	35	44	anti-parallel
Strand 3	A	114	121	parallel
Strand 4	A	102	111	anti-parallel
Strand 5	A	90	98	anti-parallel
Strand 6	A	85	87	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	78	first strand
Strand 2	A	90	98	anti-parallel
Strand 3	A	102	111	anti-parallel
Strand 4	A	124	125	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	258	first strand
Strand 2	A	193	196	parallel
Strand 3	A	170	173	parallel
Strand 4	A	292	295	parallel
Strand 5	A	560	562	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	269	first strand
Strand 2	A	274	281	anti-parallel
Strand 3	A	284	288	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	317	320	first strand
Strand 2	A	501	504	parallel
Strand 3	A	334	338	parallel
Strand 4	A	357	362	parallel
Strand 5	A	474	477	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	458	461	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	484	first strand
Strand 2	A	488	491	anti-parallel
Strand 3	A	496	498	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	55	first strand
Strand 2	B	35	44	anti-parallel
Strand 3	B	114	121	parallel
Strand 4	B	102	111	anti-parallel
Strand 5	B	90	98	anti-parallel
Strand 6	B	85	87	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	78	first strand
Strand 2	B	90	98	anti-parallel
Strand 3	B	102	111	anti-parallel
Strand 4	B	124	125	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	258	first strand
Strand 2	B	193	196	parallel
Strand 3	B	170	173	parallel
Strand 4	B	292	295	parallel
Strand 5	B	560	562	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	269	first strand
Strand 2	B	274	281	anti-parallel
Strand 3	B	284	288	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	320	first strand
Strand 2	B	501	504	parallel
Strand 3	B	334	338	parallel
Strand 4	B	357	362	parallel
Strand 5	B	474	477	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	370	first strand
Strand 2	B	458	461	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	484	first strand
Strand 2	B	488	491	anti-parallel
Strand 3	B	496	498	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	55	first strand
Strand 2	C	35	44	anti-parallel
Strand 3	C	114	121	parallel
Strand 4	C	102	111	anti-parallel
Strand 5	C	90	98	anti-parallel
Strand 6	C	85	87	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	78	first strand
Strand 2	C	90	98	anti-parallel
Strand 3	C	102	111	anti-parallel
Strand 4	C	124	125	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	257	258	first strand
Strand 2	C	193	196	parallel
Strand 3	C	170	173	parallel
Strand 4	C	292	295	parallel
Strand 5	C	560	562	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	269	first strand
Strand 2	C	274	281	anti-parallel
Strand 3	C	284	288	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	317	320	first strand
Strand 2	C	501	504	parallel
Strand 3	C	334	338	parallel
Strand 4	C	357	362	parallel
Strand 5	C	474	477	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	370	first strand
Strand 2	C	458	461	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	481	484	first strand
Strand 2	C	488	491	anti-parallel
Strand 3	C	496	498	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	55	first strand
Strand 2	D	35	44	anti-parallel
Strand 3	D	114	121	parallel
Strand 4	D	102	111	anti-parallel
Strand 5	D	90	98	anti-parallel
Strand 6	D	85	87	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	78	first strand
Strand 2	D	90	98	anti-parallel
Strand 3	D	102	111	anti-parallel
Strand 4	D	124	125	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	257	258	first strand
Strand 2	D	193	196	parallel
Strand 3	D	170	173	parallel
Strand 4	D	292	295	parallel
Strand 5	D	560	562	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	269	first strand
Strand 2	D	274	281	anti-parallel
Strand 3	D	284	288	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	317	320	first strand
Strand 2	D	501	504	parallel
Strand 3	D	334	338	parallel
Strand 4	D	357	362	parallel
Strand 5	D	474	477	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	367	370	first strand
Strand 2	D	458	461	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	484	first strand
Strand 2	D	488	491	anti-parallel
Strand 3	D	496	498	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ACS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ACS