Analysis of interatomic Contacts of Structural Units in PDB entry:
8ACU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ACU entry

There are 4 chains in PDB entry 8ACU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5GLU 370
B
 VAL 6LYS 347
E
 ASP 9LEU 147
F
 SER 8LEU 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 8ACU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
21 39Right-handed alpha
Helix 3
AA3
A
51 64Right-handed alpha
Helix 4
AA4
A
67 76Right-handed alpha
Helix 5
AA5
A
86 94Right-handed alpha
Helix 6
AA6
A
95 110Right-handed alpha
Helix 7
AA7
A
118 132Right-handed alpha
Helix 8
AA8
A
134 151Right-handed alpha
Helix 9
AA9
A
156 170Right-handed alpha
Helix 10
AB1
A
170 179Right-handed alpha
Helix 11
AB2
A
180 196Right-handed alpha
Helix 12
AB3
A
196 210Right-handed alpha
Helix 13
AB4
A
210 232Right-handed alpha
Helix 14
AB5
A
244 254Right-handed alpha
Helix 15
AB6
A
261 265Right-handed 310
Helix 16
AB7
A
274 289Right-handed alpha
Helix 17
AB8
A
317 321Right-handed 310
Helix 18
AB9
A
330 339Right-handed alpha
Helix 19
AC1
A
340 342Right-handed 310
Helix 20
AC2
A
358 362Right-handed alpha
Helix 21
AC3
A
362 370Right-handed alpha
Helix 22
AC4
B
8 17Right-handed alpha
Helix 23
AC5
B
24 37Right-handed alpha
Helix 24
AC6
B
51 64Right-handed alpha
Helix 25
AC7
B
67 76Right-handed alpha
Helix 26
AC8
B
86 94Right-handed alpha
Helix 27
AC9
B
95 110Right-handed alpha
Helix 28
AD1
B
117 121Right-handed 310
Helix 29
AD2
B
122 133Right-handed alpha
Helix 30
AD3
B
134 151Right-handed alpha
Helix 31
AD4
B
156 170Right-handed alpha
Helix 32
AD5
B
170 179Right-handed alpha
Helix 33
AD6
B
180 196Right-handed alpha
Helix 34
AD7
B
196 208Right-handed alpha
Helix 35
AD8
B
210 232Right-handed alpha
Helix 36
AD9
B
244 253Right-handed alpha
Helix 37
AE1
B
274 289Right-handed alpha
Helix 38
AE2
B
317 321Right-handed 310
Helix 39
AE3
B
330 337Right-handed alpha
Helix 40
AE4
B
338 345Right-handed alpha
Helix 41
AE5
E
15 19Right-handed 310
Helix 42
AE6
E
24 26Right-handed 310
Helix 43
AE7
E
34 46Right-handed alpha
Helix 44
AE8
E
65 72Right-handed alpha
Helix 45
AE9
E
79 85Right-handed 310
Helix 46
AF1
E
87 91Right-handed 310
Helix 47
AF2
E
104 115Right-handed alpha
Helix 48
AF3
E
133 147Right-handed alpha
Helix 49
AF4
F
15 19Right-handed 310
Helix 50
AF5
F
24 26Right-handed 310
Helix 51
AF6
F
34 46Right-handed alpha
Helix 52
AF7
F
65 72Right-handed alpha
Helix 53
AF8
F
79 83Right-handed 310
Helix 54
AF9
F
87 91Right-handed 310
Helix 55
AG1
F
104 115Right-handed alpha
Helix 56
AG2
F
133 147Right-handed alpha
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There are 6 sheets in PDB entry 8ACU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 240first strand
Strand 2
A
266 272anti-parallel
Strand 3
A
323 329parallel
Strand 4
A
311 315anti-parallel
Strand 5
A
297 298anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 241first strand
Strand 2
B
267 272anti-parallel
Strand 3
B
323 329parallel
Strand 4
B
311 315anti-parallel
Strand 5
B
297 298anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
21 22first strand
Strand 2
E
127 132anti-parallel
Strand 3
E
117 121anti-parallel
Strand 4
E
98 100parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
29 30first strand
Strand 2
E
49 53parallel
Strand 3
E
59 64anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
21 22first strand
Strand 2
F
127 132anti-parallel
Strand 3
F
117 121anti-parallel
Strand 4
F
98 100parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
29 30first strand
Strand 2
F
49 53parallel
Strand 3
F
59 64anti-parallel
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