Analysis of interatomic Contacts of Structural Units in PDB entry:
8ADC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ADC entry

There are 2 chains in PDB entry 8ADC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 283ARG 493
A
 GLU 284ARG 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8ADC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
302 308Right-handed alpha
Helix 2
AA2
B
309 311Right-handed 310
Helix 3
AA3
B
312 326Right-handed alpha
Helix 4
AA4
B
328 332Right-handed 310
Helix 5
AA5
B
333 352Right-handed alpha
Helix 6
AA6
B
361 365Right-handed 310
Helix 7
AA7
B
366 371Right-handed 310
Helix 8
AA8
B
397 407Right-handed alpha
Helix 9
AA9
B
455 467Right-handed alpha
Helix 10
AB1
B
476 484Right-handed alpha
Helix 11
AB2
A
302 309Right-handed alpha
Helix 12
AB3
A
312 325Right-handed alpha
Helix 13
AB4
A
328 332Right-handed 310
Helix 14
AB5
A
333 352Right-handed alpha
Helix 15
AB6
A
361 365Right-handed 310
Helix 16
AB7
A
366 371Right-handed 310
Helix 17
AB8
A
397 407Right-handed alpha
Helix 18
AB9
A
455 467Right-handed alpha
Helix 19
AC1
A
476 484Right-handed alpha
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There are 4 sheets in PDB entry 8ADC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
450 454anti-parallel
Strand 3
B
436 440anti-parallel
Strand 4
B
424 430anti-parallel
Strand 5
B
415 421anti-parallel
Strand 6
B
485 492anti-parallel
Strand 7
B
373 375anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 295first strand
Strand 2
B
450 454anti-parallel
Strand 3
B
436 440anti-parallel
Strand 4
B
424 430anti-parallel
Strand 5
B
415 421anti-parallel
Strand 6
B
485 492anti-parallel
Strand 7
B
391 394anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
450 454anti-parallel
Strand 3
A
436 440anti-parallel
Strand 4
A
424 430anti-parallel
Strand 5
A
415 421anti-parallel
Strand 6
A
485 492anti-parallel
Strand 7
A
373 375anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 295first strand
Strand 2
A
450 454anti-parallel
Strand 3
A
436 440anti-parallel
Strand 4
A
424 430anti-parallel
Strand 5
A
415 421anti-parallel
Strand 6
A
485 492anti-parallel
Strand 7
A
391 394anti-parallel
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