Analysis of interatomic Contacts of Structural Units in PDB entry:
8AED


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AED entry

There are 4 chains in PDB entry 8AED (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ASN 162
B
 ASP 3ASN 162
C
 SER 310ILE 329
D
 ARG 308ILE 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8AED. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
16 26Right-handed alpha
Helix 3
AA3
A
39 48Right-handed alpha
Helix 4
AA4
A
49 59Right-handed alpha
Helix 5
AA5
A
72 81Right-handed alpha
Helix 6
AA6
A
82 92Right-handed alpha
Helix 7
AA7
A
105 113Right-handed alpha
Helix 8
AA8
A
115 125Right-handed alpha
Helix 9
AA9
A
138 147Right-handed alpha
Helix 10
AB1
A
148 162Right-handed alpha
Helix 11
AB2
B
4 14Right-handed alpha
Helix 12
AB3
B
16 26Right-handed alpha
Helix 13
AB4
B
39 47Right-handed alpha
Helix 14
AB5
B
49 59Right-handed alpha
Helix 15
AB6
B
72 80Right-handed alpha
Helix 16
AB7
B
82 92Right-handed alpha
Helix 17
AB8
B
105 113Right-handed alpha
Helix 18
AB9
B
115 125Right-handed alpha
Helix 19
AC1
B
138 146Right-handed alpha
Helix 20
AC2
B
148 162Right-handed alpha
Helix 21
AC3
C
316 328Right-handed alpha
Helix 22
AC4
C
329 329Right-handed 310
Helix 23
AC5
D
308 312Right-handed 310
Helix 24
AC6
D
316 327Right-handed alpha
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There are no sheets in PDB entry 8AED
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