Analysis of interatomic Contacts of Structural Units in PDB entry:
8AEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AEL entry

There are 2 chains in PDB entry 8AEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6ASP 422
B
 GLY 34VAL 39
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8AEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 57Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
117 131Right-handed alpha
Helix 4
AA4
A
135 144Right-handed alpha
Helix 5
AA5
A
147 163Right-handed alpha
Helix 6
AA6
A
165 174Right-handed alpha
Helix 7
AA7
A
175 187Right-handed alpha
Helix 8
AA8
A
188 201Right-handed alpha
Helix 9
AA9
A
202 206Right-handed 310
Helix 10
AB1
A
207 218Right-handed alpha
Helix 11
AB2
A
219 235Right-handed alpha
Helix 12
AB3
A
237 244Right-handed alpha
Helix 13
AB4
A
247 259Right-handed alpha
Helix 14
AB5
A
270 285Right-handed alpha
Helix 15
AB6
A
292 303Right-handed alpha
Helix 16
AB7
A
304 319Right-handed alpha
Helix 17
AB8
A
322 331Right-handed alpha
Helix 18
AB9
A
332 348Right-handed alpha
Helix 19
AC1
A
348 363Right-handed alpha
Helix 20
AC2
A
367 378Right-handed alpha
Helix 21
AC3
A
382 395Right-handed alpha
Helix 22
AC4
A
397 406Right-handed alpha
Helix 23
AC5
A
407 419Right-handed alpha
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There are 2 sheets in PDB entry 8AEL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 17first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
71 72anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
25 29anti-parallel
Strand 3
B
37 38anti-parallel
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