Analysis of interatomic Contacts of Structural Units in PDB entry:
8AEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AEW entry

There are 2 chains in PDB entry 8AEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 4ASN 548
A
 THR 4ASN 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 8AEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
18 32Right-handed alpha
Helix 2
AA2
B
42 58Right-handed alpha
Helix 3
AA3
B
60 62Right-handed 310
Helix 4
AA4
B
73 89Right-handed alpha
Helix 5
AA5
B
106 110Right-handed 310
Helix 6
AA6
B
124 133Right-handed alpha
Helix 7
AA7
B
133 144Right-handed alpha
Helix 8
AA8
B
145 147Right-handed 310
Helix 9
AA9
B
158 163Right-handed 310
Helix 10
AB1
B
168 191Right-handed alpha
Helix 11
AB2
B
206 221Right-handed alpha
Helix 12
AB3
B
225 233Right-handed alpha
Helix 13
AB4
B
252 265Right-handed alpha
Helix 14
AB5
B
266 269Right-handed 310
Helix 15
AB6
B
300 304Right-handed 310
Helix 16
AB7
B
315 329Right-handed alpha
Helix 17
AB8
B
339 355Right-handed alpha
Helix 18
AB9
B
373 387Right-handed alpha
Helix 19
AC1
B
412 424Right-handed alpha
Helix 20
AC2
B
424 440Right-handed alpha
Helix 21
AC3
B
466 497Right-handed alpha
Helix 22
AC4
B
517 534Right-handed alpha
Helix 23
AC5
A
19 32Right-handed alpha
Helix 24
AC6
A
42 58Right-handed alpha
Helix 25
AC7
A
73 89Right-handed alpha
Helix 26
AC8
A
106 110Right-handed 310
Helix 27
AC9
A
113 117Right-handed 310
Helix 28
AD1
A
124 133Right-handed alpha
Helix 29
AD2
A
133 143Right-handed alpha
Helix 30
AD3
A
144 147Right-handed 310
Helix 31
AD4
A
158 163Right-handed 310
Helix 32
AD5
A
168 191Right-handed alpha
Helix 33
AD6
A
207 220Right-handed alpha
Helix 34
AD7
A
225 234Right-handed alpha
Helix 35
AD8
A
252 265Right-handed alpha
Helix 36
AD9
A
266 269Right-handed 310
Helix 37
AE1
A
300 304Right-handed 310
Helix 38
AE2
A
315 329Right-handed alpha
Helix 39
AE3
A
339 355Right-handed alpha
Helix 40
AE4
A
373 387Right-handed alpha
Helix 41
AE5
A
412 424Right-handed alpha
Helix 42
AE6
A
424 442Right-handed alpha
Helix 43
AE7
A
466 497Right-handed alpha
Helix 44
AE8
A
517 534Right-handed alpha
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There are 6 sheets in PDB entry 8AEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 68first strand
Strand 2
B
35 40parallel
Strand 3
B
11 14parallel
Strand 4
B
93 96parallel
Strand 5
B
152 156parallel
Strand 6
B
195 201parallel
Strand 7
B
275 278parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
246 247anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 291first strand
Strand 2
B
542 544parallel
Strand 3
B
506 512parallel
Strand 4
B
453 460parallel
Strand 5
B
393 396parallel
Strand 6
B
307 312parallel
Strand 7
B
332 337parallel
Strand 8
B
365 368parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
35 40parallel
Strand 3
A
11 14parallel
Strand 4
A
93 96parallel
Strand 5
A
152 156parallel
Strand 6
A
195 201parallel
Strand 7
A
275 278parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 240first strand
Strand 2
A
246 247anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
542 544parallel
Strand 3
A
506 512parallel
Strand 4
A
453 460parallel
Strand 5
A
393 396parallel
Strand 6
A
307 312parallel
Strand 7
A
332 337parallel
Strand 8
A
365 368parallel
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