Analysis of interatomic Contacts of Structural Units in PDB entry:
8AF6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AF6 entry

There is 1 chain in PDB entry 8AF6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5SER 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 8AF6. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
155 164Right-handed alpha
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There are 2 sheets in PDB entry 8AF6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
A
16 22anti-parallel
Strand 3
A
48 55anti-parallel
Strand 4
A
171 182anti-parallel
Strand 5
A
75 84anti-parallel
Strand 6
A
88 96anti-parallel
Strand 7
A
135 144parallel
Strand 8
A
116 128anti-parallel
Strand 9
A
106 113anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
185 192anti-parallel
Strand 4
A
62 72anti-parallel
Strand 5
A
151 154anti-parallel
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