Analysis of interatomic Contacts of Structural Units in PDB entry:
8AG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AG9 entry

There is 1 chain in PDB entry 8AG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 192SER 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8AG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
212 222Right-handed alpha
Helix 2
AA2
A
240 244Right-handed 310
Helix 3
AA3
A
246 272Right-handed alpha
Helix 4
AA4
A
292 296Right-handed 310
Helix 5
AA5
A
297 316Right-handed alpha
Helix 6
AA6
A
341 357Right-handed alpha
Helix 7
AA7
A
371 378Right-handed 310
Helix 8
AA8
A
395 400Right-handed alpha
Helix 9
AA9
A
422 441Right-handed alpha
Helix 10
AB1
A
458 475Right-handed alpha
Helix 11
AB2
A
486 490Right-handed 310
Helix 12
AB3
A
507 518Right-handed alpha
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There are 2 sheets in PDB entry 8AG9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 207first strand
Strand 2
A
227 232parallel
Strand 3
A
274 279parallel
Strand 4
A
321 325parallel
Strand 5
A
361 364parallel
Strand 6
A
386 392parallel
Strand 7
A
444 449parallel
Strand 8
A
477 483parallel
Strand 9
A
203 207parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
419 421anti-parallel
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