Analysis of interatomic Contacts of Structural Units in PDB entry:
8AHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AHZ entry

There are 3 chains in PDB entry 8AHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3LEU 239
B
 GLY -3ARG 226
C
 GLY -3GLY 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8AHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 20Right-handed 310
Helix 2
AA2
A
24 41Right-handed alpha
Helix 3
AA3
A
78 90Right-handed alpha
Helix 4
AA4
A
104 112Right-handed alpha
Helix 5
AA5
A
127 132Right-handed 310
Helix 6
AA6
A
138 147Right-handed alpha
Helix 7
AA7
A
147 158Right-handed alpha
Helix 8
AA8
A
163 169Right-handed alpha
Helix 9
AA9
A
178 191Right-handed alpha
Helix 10
AB1
A
194 209Right-handed alpha
Helix 11
AB2
A
214 228Right-handed alpha
Helix 12
AB3
A
229 239Right-handed alpha
Helix 13
AB4
B
16 20Right-handed 310
Helix 14
AB5
B
24 41Right-handed alpha
Helix 15
AB6
B
78 90Right-handed alpha
Helix 16
AB7
B
104 112Right-handed alpha
Helix 17
AB8
B
127 132Right-handed 310
Helix 18
AB9
B
138 147Right-handed alpha
Helix 19
AC1
B
147 158Right-handed alpha
Helix 20
AC2
B
163 169Right-handed alpha
Helix 21
AC3
B
178 191Right-handed alpha
Helix 22
AC4
B
194 209Right-handed alpha
Helix 23
AC5
B
214 226Right-handed alpha
Helix 24
AC6
C
16 20Right-handed 310
Helix 25
AC7
C
24 41Right-handed alpha
Helix 26
AC8
C
78 90Right-handed alpha
Helix 27
AC9
C
104 112Right-handed alpha
Helix 28
AD1
C
127 132Right-handed 310
Helix 29
AD2
C
138 147Right-handed alpha
Helix 30
AD3
C
147 158Right-handed alpha
Helix 31
AD4
C
163 169Right-handed alpha
Helix 32
AD5
C
178 191Right-handed alpha
Helix 33
AD6
C
194 209Right-handed alpha
Helix 34
AD7
C
214 228Right-handed alpha
Helix 35
AD8
C
229 233Right-handed 310
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There are 8 sheets in PDB entry 8AHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 6first strand
Strand 2
A
9 14anti-parallel
Strand 3
A
46 50parallel
Strand 4
A
93 98parallel
Strand 5
A
115 118parallel
Strand 6
A
174 175parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
59 60parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
101 103parallel
Strand 3
A
123 125parallel
Strand 4
A
160 162anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1 6first strand
Strand 2
B
9 14anti-parallel
Strand 3
B
46 50parallel
Strand 4
B
93 98parallel
Strand 5
B
115 118parallel
Strand 6
B
174 175parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
59 60parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
101 103parallel
Strand 3
B
123 125parallel
Strand 4
B
160 162anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1 5first strand
Strand 2
C
9 14anti-parallel
Strand 3
C
46 50parallel
Strand 4
C
93 98parallel
Strand 5
C
115 118parallel
Strand 6
C
174 175parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 57first strand
Strand 2
C
101 103parallel
Strand 3
C
123 125parallel
Strand 4
C
160 162anti-parallel
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