Analysis of interatomic Contacts of Structural Units in PDB entry:
8AIR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AIR entry

There is 1 chain in PDB entry 8AIR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 25LEU 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8AIR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 38Right-handed alpha
Helix 2
AA2
A
82 87Right-handed 310
Helix 3
AA3
A
88 95Right-handed alpha
Helix 4
AA4
A
111 130Right-handed alpha
Helix 5
AA5
A
152 165Right-handed alpha
Helix 6
AA6
A
206 214Right-handed alpha
Helix 7
AA7
A
236 252Right-handed alpha
Helix 8
AA8
A
254 256Right-handed 310
Helix 9
AA9
A
257 263Right-handed alpha
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There are 2 sheets in PDB entry 8AIR. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 50first strand
Strand 2
A
58 63anti-parallel
Strand 3
A
98 103anti-parallel
Strand 4
A
70 76parallel
Strand 5
A
141 150parallel
Strand 6
A
170 171parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 195first strand
Strand 2
A
219 224parallel
Strand 3
A
270 276anti-parallel
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