Analysis of interatomic Contacts of Structural Units in PDB entry:
8AIT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AIT entry

There is 1 chain in PDB entry 8AIT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 41TYR 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8AIT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 55Right-handed alpha
Helix 2
AA2
A
101 106Right-handed 310
Helix 3
AA3
A
107 114Right-handed alpha
Helix 4
AA4
A
130 148Right-handed alpha
Helix 5
AA5
A
171 181Right-handed alpha
Helix 6
AA6
A
223 231Right-handed alpha
Helix 7
AA7
A
256 273Right-handed alpha
Helix 8
AA8
A
275 277Right-handed 310
Helix 9
AA9
A
278 283Right-handed alpha
Helix 10
AB1
A
286 290Right-handed 310
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There are 2 sheets in PDB entry 8AIT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
118 122anti-parallel
Strand 4
A
89 95parallel
Strand 5
A
160 170parallel
Strand 6
A
188 192parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 212first strand
Strand 2
A
237 242parallel
Strand 3
A
293 298anti-parallel
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