Analysis of interatomic Contacts of Structural Units in PDB entry:
8AR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AR8 entry

There are 3 chains in PDB entry 8AR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 64GLY 557
B
 ALA 61GLY 557
C
 ALA 61PRO 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are123 helices in PDB entry 8AR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 91Right-handed alpha
Helix 2
AA2
A
97 113Right-handed alpha
Helix 3
AA3
A
160 178Right-handed alpha
Helix 4
AA4
A
192 196Right-handed 310
Helix 5
AA5
A
197 215Right-handed alpha
Helix 6
AA6
A
232 246Right-handed alpha
Helix 7
AA7
A
253 258Right-handed 310
Helix 8
AA8
A
262 266Right-handed 310
Helix 9
AA9
A
273 288Right-handed alpha
Helix 10
AB1
A
289 296Right-handed alpha
Helix 11
AB2
A
313 326Right-handed alpha
Helix 12
AB3
A
347 359Right-handed alpha
Helix 13
AB4
A
395 399Right-handed 310
Helix 14
AB5
A
413 423Right-handed alpha
Helix 15
AB6
A
429 434Right-handed alpha
Helix 16
AB7
A
435 451Right-handed alpha
Helix 17
AB8
A
458 482Right-handed alpha
Helix 18
AB9
A
493 502Right-handed alpha
Helix 19
AC1
A
504 531Right-handed alpha
Helix 20
AC2
A
536 557Right-handed alpha
Helix 21
AC3
B
62 65Right-handed 310
Helix 22
AC4
B
66 91Right-handed alpha
Helix 23
AC5
B
99 113Right-handed alpha
Helix 24
AC6
B
160 178Right-handed alpha
Helix 25
AC7
B
192 196Right-handed 310
Helix 26
AC8
B
197 215Right-handed alpha
Helix 27
AC9
B
232 246Right-handed alpha
Helix 28
AD1
B
253 258Right-handed 310
Helix 29
AD2
B
262 266Right-handed 310
Helix 30
AD3
B
273 288Right-handed alpha
Helix 31
AD4
B
289 296Right-handed alpha
Helix 32
AD5
B
313 326Right-handed alpha
Helix 33
AD6
B
347 359Right-handed alpha
Helix 34
AD7
B
395 399Right-handed 310
Helix 35
AD8
B
413 423Right-handed alpha
Helix 36
AD9
B
429 434Right-handed alpha
Helix 37
AE1
B
435 451Right-handed alpha
Helix 38
AE2
B
458 482Right-handed alpha
Helix 39
AE3
B
493 502Right-handed alpha
Helix 40
AE4
B
504 531Right-handed alpha
Helix 41
AE5
B
536 557Right-handed alpha
Helix 42
AE6
C
62 65Right-handed 310
Helix 43
AE7
C
66 91Right-handed alpha
Helix 44
AE8
C
97 113Right-handed alpha
Helix 45
AE9
C
160 178Right-handed alpha
Helix 46
AF1
C
192 196Right-handed 310
Helix 47
AF2
C
197 215Right-handed alpha
Helix 48
AF3
C
232 246Right-handed alpha
Helix 49
AF4
C
253 258Right-handed 310
Helix 50
AF5
C
262 266Right-handed 310
Helix 51
AF6
C
273 288Right-handed alpha
Helix 52
AF7
C
289 296Right-handed alpha
Helix 53
AF8
C
313 326Right-handed alpha
Helix 54
AF9
C
347 359Right-handed alpha
Helix 55
AG1
C
395 399Right-handed 310
Helix 56
AG2
C
413 423Right-handed alpha
Helix 57
AG3
C
429 434Right-handed alpha
Helix 58
AG4
C
435 451Right-handed alpha
Helix 59
AG5
C
458 482Right-handed alpha
Helix 60
AG6
C
493 502Right-handed alpha
Helix 61
AG7
C
504 531Right-handed alpha
Helix 62
AG8
C
536 557Right-handed alpha
Helix 63
AG9
D
67 91Right-handed alpha
Helix 64
AH1
D
97 113Right-handed alpha
Helix 65
AH2
D
160 178Right-handed alpha
Helix 66
AH3
D
192 196Right-handed 310
Helix 67
AH4
D
197 215Right-handed alpha
Helix 68
AH5
D
232 246Right-handed alpha
Helix 69
AH6
D
253 258Right-handed 310
Helix 70
AH7
D
262 266Right-handed 310
Helix 71
AH8
D
273 288Right-handed alpha
Helix 72
AH9
D
289 296Right-handed alpha
Helix 73
AI1
D
313 326Right-handed alpha
Helix 74
AI2
D
347 359Right-handed alpha
Helix 75
AI3
D
395 399Right-handed 310
Helix 76
AI4
D
413 423Right-handed alpha
Helix 77
AI5
D
429 434Right-handed alpha
Helix 78
AI6
D
435 451Right-handed alpha
Helix 79
AI7
D
458 482Right-handed alpha
Helix 80
AI8
D
493 502Right-handed alpha
Helix 81
AI9
D
504 531Right-handed alpha
Helix 82
AJ1
D
536 557Right-handed alpha
Helix 83
AJ2
E
66 91Right-handed alpha
Helix 84
AJ3
E
97 113Right-handed alpha
Helix 85
AJ4
E
160 178Right-handed alpha
Helix 86
AJ5
E
192 196Right-handed 310
Helix 87
AJ6
E
197 215Right-handed alpha
Helix 88
AJ7
E
232 246Right-handed alpha
Helix 89
AJ8
E
253 258Right-handed 310
Helix 90
AJ9
E
262 266Right-handed 310
Helix 91
AK1
E
273 288Right-handed alpha
Helix 92
AK2
E
289 296Right-handed alpha
Helix 93
AK3
E
313 326Right-handed alpha
Helix 94
AK4
E
347 359Right-handed alpha
Helix 95
AK5
E
395 399Right-handed 310
Helix 96
AK6
E
413 423Right-handed alpha
Helix 97
AK7
E
429 434Right-handed alpha
Helix 98
AK8
E
435 451Right-handed alpha
Helix 99
AK9
E
458 482Right-handed alpha
Helix 100
AL1
E
493 502Right-handed alpha
Helix 101
AL2
E
504 531Right-handed alpha
Helix 102
AL3
E
536 556Right-handed alpha
Helix 103
AL4
F
62 65Right-handed 310
Helix 104
AL5
F
66 91Right-handed alpha
Helix 105
AL6
F
101 113Right-handed alpha
Helix 106
AL7
F
160 178Right-handed alpha
Helix 107
AL8
F
192 196Right-handed 310
Helix 108
AL9
F
197 215Right-handed alpha
Helix 109
AM1
F
232 246Right-handed alpha
Helix 110
AM2
F
253 258Right-handed 310
Helix 111
AM3
F
262 266Right-handed 310
Helix 112
AM4
F
273 288Right-handed alpha
Helix 113
AM5
F
289 296Right-handed alpha
Helix 114
AM6
F
313 326Right-handed alpha
Helix 115
AM7
F
347 359Right-handed alpha
Helix 116
AM8
F
395 399Right-handed 310
Helix 117
AM9
F
413 423Right-handed alpha
Helix 118
AN1
F
429 434Right-handed alpha
Helix 119
AN2
F
435 451Right-handed alpha
Helix 120
AN3
F
458 481Right-handed alpha
Helix 121
AN4
F
493 502Right-handed alpha
Helix 122
AN5
F
504 531Right-handed alpha
Helix 123
AN6
F
536 557Right-handed alpha
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There are 9 sheets in PDB entry 8AR8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
149 155parallel
Strand 3
A
183 189parallel
Strand 4
A
132 141anti-parallel
Strand 5
A
117 126anti-parallel
Strand 6
E
117 126anti-parallel
Strand 7
E
132 141anti-parallel
Strand 8
E
183 189anti-parallel
Strand 9
E
149 155parallel
Strand 10
E
223 226parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
339 341anti-parallel
Strand 3
A
329 334anti-parallel
Strand 4
A
306 310parallel
Strand 5
A
381 384parallel
Strand 6
A
403 405parallel
Strand 7
A
426 428parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
149 155parallel
Strand 3
B
183 189parallel
Strand 4
B
132 141anti-parallel
Strand 5
B
117 126anti-parallel
Strand 6
D
117 126anti-parallel
Strand 7
D
132 141anti-parallel
Strand 8
D
183 189anti-parallel
Strand 9
D
149 155parallel
Strand 10
D
223 226parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 370first strand
Strand 2
B
339 341anti-parallel
Strand 3
B
329 334anti-parallel
Strand 4
B
306 310parallel
Strand 5
B
381 384parallel
Strand 6
B
403 405parallel
Strand 7
B
426 428parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
223 226first strand
Strand 2
C
149 155parallel
Strand 3
C
183 189parallel
Strand 4
C
132 141anti-parallel
Strand 5
C
117 126anti-parallel
Strand 6
F
117 126anti-parallel
Strand 7
F
132 141anti-parallel
Strand 8
F
183 189anti-parallel
Strand 9
F
149 155parallel
Strand 10
F
223 226parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
368 370first strand
Strand 2
C
339 341anti-parallel
Strand 3
C
329 334anti-parallel
Strand 4
C
306 310parallel
Strand 5
C
381 384parallel
Strand 6
C
403 405parallel
Strand 7
C
426 428parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 370first strand
Strand 2
D
339 341anti-parallel
Strand 3
D
329 334anti-parallel
Strand 4
D
306 310parallel
Strand 5
D
381 384parallel
Strand 6
D
403 405parallel
Strand 7
D
426 428parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
339 341first strand
Strand 2
E
329 334anti-parallel
Strand 3
E
306 310parallel
Strand 4
E
381 384parallel
Strand 5
E
403 405parallel
Strand 6
E
426 428parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
368 370first strand
Strand 2
F
339 341anti-parallel
Strand 3
F
329 334anti-parallel
Strand 4
F
306 310parallel
Strand 5
F
381 384parallel
Strand 6
F
403 405parallel
Strand 7
F
426 428parallel
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