Analysis of interatomic Contacts of Structural Units in PDB entry:
8AS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AS6 entry

There are 2 chains in PDB entry 8AS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 1613
P
 A 1 C 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 8AS6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
77 84Right-handed alpha
Helix 3
AA3
A
94 99Right-handed alpha
Helix 4
AA4
A
134 150Right-handed alpha
Helix 5
AA5
A
150 156Right-handed alpha
Helix 6
AA6
A
186 209Right-handed alpha
Helix 7
AA7
A
218 234Right-handed alpha
Helix 8
AA8
A
237 245Right-handed alpha
Helix 9
AA9
A
249 258Right-handed alpha
Helix 10
AB1
A
262 285Right-handed alpha
Helix 11
AB2
A
294 312Right-handed alpha
Helix 12
AB3
A
360 374Right-handed alpha
Helix 13
AB4
A
384 387Right-handed 310
Helix 14
AB5
A
388 393Right-handed alpha
Helix 15
AB6
A
416 426Right-handed alpha
Helix 16
AB7
A
436 447Right-handed alpha
Helix 17
AB8
A
457 463Right-handed alpha
Helix 18
AB9
A
477 491Right-handed alpha
Helix 19
AC1
A
496 510Right-handed alpha
Helix 20
AC2
A
512 530Right-handed alpha
Helix 21
AC3
A
573 575Right-handed 310
Helix 22
AC4
A
611 627Right-handed alpha
Helix 23
AC5
A
638 655Right-handed alpha
Helix 24
AC6
A
656 665Right-handed alpha
Helix 25
AC7
A
666 672Right-handed alpha
Helix 26
AC8
A
696 716Right-handed alpha
Helix 27
AC9
A
742 749Right-handed alpha
Helix 28
AD1
A
750 756Right-handed 310
Helix 29
AD2
A
767 775Right-handed alpha
Helix 30
AD3
A
777 781Right-handed 310
Helix 31
AD4
A
802 813Right-handed alpha
Helix 32
AD5
A
817 822Right-handed alpha
Helix 33
AD6
A
825 839Right-handed alpha
Helix 34
AD7
A
841 845Right-handed 310
Helix 35
AD8
A
860 864Right-handed 310
Helix 36
AD9
A
873 885Right-handed alpha
Helix 37
AE1
A
888 903Right-handed alpha
Helix 38
AE2
A
926 945Right-handed alpha
Helix 39
AE3
A
954 958Right-handed 310
Helix 40
AE4
A
964 973Right-handed alpha
Helix 41
AE5
A
994 1005Right-handed alpha
Helix 42
AE6
A
1011 1020Right-handed alpha
Helix 43
AE7
A
1029 1038Right-handed alpha
Helix 44
AE8
A
1046 1058Right-handed alpha
Helix 45
AE9
A
1084 1108Right-handed alpha
Helix 46
AF1
A
1138 1160Right-handed alpha
Helix 47
AF2
A
1161 1164Right-handed 310
Helix 48
AF3
A
1194 1200Right-handed alpha
Helix 49
AF4
A
1211 1228Right-handed alpha
Helix 50
AF5
A
1231 1250Right-handed alpha
Helix 51
AF6
A
1258 1267Right-handed alpha
Helix 52
AF7
A
1270 1274Right-handed 310
Helix 53
AF8
A
1288 1300Right-handed alpha
Helix 54
AF9
A
1300 1307Right-handed alpha
Helix 55
AG1
A
1308 1310Right-handed 310
Helix 56
AG2
A
1348 1355Right-handed alpha
Helix 57
AG3
A
1362 1368Right-handed alpha
Helix 58
AG4
A
1369 1374Right-handed alpha
Helix 59
AG5
A
1378 1391Right-handed alpha
Helix 60
AG6
A
1392 1399Right-handed alpha
Helix 61
AG7
A
1404 1411Right-handed alpha
Helix 62
AG8
A
1412 1414Right-handed 310
Helix 63
AG9
A
1437 1448Right-handed alpha
Helix 64
AH1
A
1460 1465Right-handed alpha
Helix 65
AH2
A
1467 1479Right-handed alpha
Helix 66
AH3
A
1506 1510Right-handed 310
Helix 67
AH4
A
1513 1523Right-handed alpha
Helix 68
AH5
A
1537 1545Right-handed alpha
Helix 69
AH6
A
1551 1559Right-handed alpha
Helix 70
AH7
A
1565 1574Right-handed alpha
Helix 71
AH8
A
1595 1605Right-handed alpha
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There are 13 sheets in PDB entry 8AS6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
164 173parallel
Strand 3
A
176 179anti-parallel
Strand 4
A
22 25anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
164 173parallel
Strand 3
A
122 129parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
47 49anti-parallel
Strand 3
A
66 68anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
577 578anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 556anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
593 595anti-parallel
Strand 6
A
588 589anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 556anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
599 601anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 722first strand
Strand 2
A
727 730anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
923 925first strand
Strand 2
A
906 910anti-parallel
Strand 3
A
1024 1027parallel
Strand 4
A
1071 1074anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 985first strand
Strand 2
A
1127 1134anti-parallel
Strand 3
A
1117 1123anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1185 1187first strand
Strand 2
A
1190 1192anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1338 1339first strand
Strand 2
A
1421 1422anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1496 1497first strand
Strand 2
A
1584 1585anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1500 1503first strand
Strand 2
A
1579 1581anti-parallel
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