Analysis of interatomic Contacts of Structural Units in PDB entry:
8AS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AS7 entry

There are 4 chains in PDB entry 8AS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 1612
P
 A 1 A 17
T
 C 10 U 26
G
 A 1 A 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 8AS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
77 82Right-handed alpha
Helix 3
AA3
A
94 99Right-handed alpha
Helix 4
AA4
A
134 158Right-handed alpha
Helix 5
AA5
A
184 207Right-handed alpha
Helix 6
AA6
A
208 213Right-handed 310
Helix 7
AA7
A
217 234Right-handed alpha
Helix 8
AA8
A
237 245Right-handed alpha
Helix 9
AA9
A
249 259Right-handed alpha
Helix 10
AB1
A
262 285Right-handed alpha
Helix 11
AB2
A
292 318Right-handed alpha
Helix 12
AB3
A
352 357Right-handed alpha
Helix 13
AB4
A
358 374Right-handed alpha
Helix 14
AB5
A
383 393Right-handed alpha
Helix 15
AB6
A
416 426Right-handed alpha
Helix 16
AB7
A
436 447Right-handed alpha
Helix 17
AB8
A
456 465Right-handed alpha
Helix 18
AB9
A
477 492Right-handed alpha
Helix 19
AC1
A
493 495Right-handed 310
Helix 20
AC2
A
496 511Right-handed alpha
Helix 21
AC3
A
512 532Right-handed alpha
Helix 22
AC4
A
573 575Right-handed 310
Helix 23
AC5
A
602 611Right-handed alpha
Helix 24
AC6
A
611 627Right-handed alpha
Helix 25
AC7
A
638 655Right-handed alpha
Helix 26
AC8
A
656 665Right-handed alpha
Helix 27
AC9
A
665 672Right-handed alpha
Helix 28
AD1
A
673 675Right-handed 310
Helix 29
AD2
A
682 688Right-handed 310
Helix 30
AD3
A
696 716Right-handed alpha
Helix 31
AD4
A
742 749Right-handed alpha
Helix 32
AD5
A
750 756Right-handed 310
Helix 33
AD6
A
766 779Right-handed alpha
Helix 34
AD7
A
784 788Right-handed 310
Helix 35
AD8
A
802 822Right-handed alpha
Helix 36
AD9
A
824 840Right-handed alpha
Helix 37
AE1
A
841 846Right-handed 310
Helix 38
AE2
A
855 859Right-handed 310
Helix 39
AE3
A
860 864Right-handed 310
Helix 40
AE4
A
874 884Right-handed alpha
Helix 41
AE5
A
889 904Right-handed alpha
Helix 42
AE6
A
926 945Right-handed alpha
Helix 43
AE7
A
956 973Right-handed alpha
Helix 44
AE8
A
988 993Right-handed alpha
Helix 45
AE9
A
994 1005Right-handed alpha
Helix 46
AF1
A
1007 1009Right-handed 310
Helix 47
AF2
A
1010 1020Right-handed alpha
Helix 48
AF3
A
1029 1038Right-handed alpha
Helix 49
AF4
A
1046 1057Right-handed alpha
Helix 50
AF5
A
1083 1109Right-handed alpha
Helix 51
AF6
A
1138 1155Right-handed alpha
Helix 52
AF7
A
1155 1160Right-handed alpha
Helix 53
AF8
A
1161 1164Right-handed 310
Helix 54
AF9
A
1194 1200Right-handed alpha
Helix 55
AG1
A
1212 1228Right-handed alpha
Helix 56
AG2
A
1231 1250Right-handed alpha
Helix 57
AG3
A
1258 1266Right-handed alpha
Helix 58
AG4
A
1270 1274Right-handed 310
Helix 59
AG5
A
1280 1284Right-handed 310
Helix 60
AG6
A
1288 1300Right-handed alpha
Helix 61
AG7
A
1301 1316Right-handed alpha
Helix 62
AG8
A
1333 1336Right-handed 310
Helix 63
AG9
A
1342 1344Right-handed 310
Helix 64
AH1
A
1345 1353Right-handed alpha
Helix 65
AH2
A
1360 1368Right-handed alpha
Helix 66
AH3
A
1369 1374Right-handed 310
Helix 67
AH4
A
1378 1391Right-handed alpha
Helix 68
AH5
A
1392 1397Right-handed alpha
Helix 69
AH6
A
1403 1411Right-handed alpha
Helix 70
AH7
A
1412 1414Right-handed 310
Helix 71
AH8
A
1437 1448Right-handed alpha
Helix 72
AH9
A
1449 1451Right-handed 310
Helix 73
AI1
A
1457 1464Right-handed alpha
Helix 74
AI2
A
1467 1476Right-handed alpha
Helix 75
AI3
A
1512 1523Right-handed alpha
Helix 76
AI4
A
1530 1546Right-handed alpha
Helix 77
AI5
A
1551 1557Right-handed alpha
Helix 78
AI6
A
1563 1575Right-handed alpha
Helix 79
AI7
A
1595 1604Right-handed alpha
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There are 14 sheets in PDB entry 8AS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
165 172parallel
Strand 3
A
176 179anti-parallel
Strand 4
A
22 25anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
165 172parallel
Strand 3
A
122 129parallel
Strand 4
A
113 115anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
69 70anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
577 578anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
551 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
593 595anti-parallel
Strand 6
A
588 589anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
551 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
599 601anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 723first strand
Strand 2
A
726 730anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
872 873anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 925first strand
Strand 2
A
906 912anti-parallel
Strand 3
A
1024 1027parallel
Strand 4
A
1071 1074anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1123first strand
Strand 2
A
1128 1134anti-parallel
Strand 3
A
978 984anti-parallel
Strand 4
A
1172 1176anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1178 1180first strand
Strand 2
A
1185 1187anti-parallel
Strand 3
A
1191 1192anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1338 1340first strand
Strand 2
A
1421 1423anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1486 1488first strand
Strand 2
A
1609 1611anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1496 1503first strand
Strand 2
A
1579 1585anti-parallel
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