Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ASA entry

There are 8 chains in PDB entry 8ASA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -1	SER 279
B	LEU -2	SER 279
C	GLY -1	SER 279
D	SER 0	GLN 280
E	GLY -1	SER 279
F	SER 0	SER 279
G	GLY -1	SER 279
H	SER 0	SER 279

There are137 helices in PDB entry 8ASA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	6	Right-handed 310
Helix 2	AA2	A	15	25	Right-handed alpha
Helix 3	AA3	A	26	29	Right-handed 310
Helix 4	AA4	A	35	40	Right-handed alpha
Helix 5	AA5	A	51	55	Right-handed 310
Helix 6	AA6	A	62	64	Right-handed 310
Helix 7	AA7	A	77	79	Right-handed 310
Helix 8	AA8	A	80	85	Right-handed alpha
Helix 9	AA9	A	119	126	Right-handed alpha
Helix 10	AB1	A	127	136	Right-handed alpha
Helix 11	AB2	A	150	153	Right-handed 310
Helix 12	AB3	A	154	166	Right-handed alpha
Helix 13	AB4	A	179	192	Right-handed alpha
Helix 14	AB5	A	206	215	Right-handed alpha
Helix 15	AB6	A	224	228	Right-handed 310
Helix 16	AB7	A	245	259	Right-handed alpha
Helix 17	AB8	A	262	266	Right-handed 310
Helix 18	AB9	A	267	277	Right-handed alpha
Helix 19	AC1	B	2	6	Right-handed 310
Helix 20	AC2	B	15	25	Right-handed alpha
Helix 21	AC3	B	35	40	Right-handed alpha
Helix 22	AC4	B	51	55	Right-handed 310
Helix 23	AC5	B	62	64	Right-handed 310
Helix 24	AC6	B	77	79	Right-handed 310
Helix 25	AC7	B	80	85	Right-handed alpha
Helix 26	AC8	B	119	126	Right-handed alpha
Helix 27	AC9	B	127	137	Right-handed alpha
Helix 28	AD1	B	150	153	Right-handed 310
Helix 29	AD2	B	154	166	Right-handed alpha
Helix 30	AD3	B	179	192	Right-handed alpha
Helix 31	AD4	B	206	215	Right-handed alpha
Helix 32	AD5	B	224	231	Right-handed 310
Helix 33	AD6	B	245	259	Right-handed alpha
Helix 34	AD7	B	262	266	Right-handed 310
Helix 35	AD8	B	267	278	Right-handed alpha
Helix 36	AD9	C	2	6	Right-handed 310
Helix 37	AE1	C	15	26	Right-handed alpha
Helix 38	AE2	C	35	40	Right-handed alpha
Helix 39	AE3	C	51	55	Right-handed 310
Helix 40	AE4	C	62	64	Right-handed 310
Helix 41	AE5	C	77	79	Right-handed 310
Helix 42	AE6	C	80	85	Right-handed alpha
Helix 43	AE7	C	119	126	Right-handed alpha
Helix 44	AE8	C	127	137	Right-handed alpha
Helix 45	AE9	C	150	153	Right-handed 310
Helix 46	AF1	C	154	166	Right-handed alpha
Helix 47	AF2	C	179	192	Right-handed alpha
Helix 48	AF3	C	206	215	Right-handed alpha
Helix 49	AF4	C	224	231	Right-handed 310
Helix 50	AF5	C	245	259	Right-handed alpha
Helix 51	AF6	C	262	266	Right-handed 310
Helix 52	AF7	C	267	278	Right-handed alpha
Helix 53	AF8	D	2	6	Right-handed 310
Helix 54	AF9	D	15	26	Right-handed alpha
Helix 55	AG1	D	35	40	Right-handed alpha
Helix 56	AG2	D	51	55	Right-handed 310
Helix 57	AG3	D	62	64	Right-handed 310
Helix 58	AG4	D	77	79	Right-handed 310
Helix 59	AG5	D	80	85	Right-handed alpha
Helix 60	AG6	D	119	126	Right-handed alpha
Helix 61	AG7	D	127	136	Right-handed alpha
Helix 62	AG8	D	150	153	Right-handed 310
Helix 63	AG9	D	154	166	Right-handed alpha
Helix 64	AH1	D	179	192	Right-handed alpha
Helix 65	AH2	D	206	215	Right-handed alpha
Helix 66	AH3	D	224	231	Right-handed 310
Helix 67	AH4	D	245	258	Right-handed alpha
Helix 68	AH5	D	262	266	Right-handed 310
Helix 69	AH6	D	267	278	Right-handed alpha
Helix 70	AH7	E	2	6	Right-handed 310
Helix 71	AH8	E	15	24	Right-handed alpha
Helix 72	AH9	E	25	28	Right-handed 310
Helix 73	AI1	E	35	40	Right-handed alpha
Helix 74	AI2	E	51	55	Right-handed 310
Helix 75	AI3	E	77	79	Right-handed 310
Helix 76	AI4	E	80	85	Right-handed alpha
Helix 77	AI5	E	119	126	Right-handed alpha
Helix 78	AI6	E	127	136	Right-handed alpha
Helix 79	AI7	E	150	153	Right-handed 310
Helix 80	AI8	E	154	166	Right-handed alpha
Helix 81	AI9	E	179	192	Right-handed alpha
Helix 82	AJ1	E	206	215	Right-handed alpha
Helix 83	AJ2	E	224	228	Right-handed 310
Helix 84	AJ3	E	245	259	Right-handed alpha
Helix 85	AJ4	E	262	266	Right-handed 310
Helix 86	AJ5	E	267	278	Right-handed alpha
Helix 87	AJ6	F	2	6	Right-handed 310
Helix 88	AJ7	F	15	26	Right-handed alpha
Helix 89	AJ8	F	35	40	Right-handed alpha
Helix 90	AJ9	F	51	55	Right-handed 310
Helix 91	AK1	F	62	64	Right-handed 310
Helix 92	AK2	F	77	79	Right-handed 310
Helix 93	AK3	F	80	85	Right-handed alpha
Helix 94	AK4	F	119	126	Right-handed alpha
Helix 95	AK5	F	127	137	Right-handed alpha
Helix 96	AK6	F	150	153	Right-handed 310
Helix 97	AK7	F	154	166	Right-handed alpha
Helix 98	AK8	F	179	192	Right-handed alpha
Helix 99	AK9	F	206	215	Right-handed alpha
Helix 100	AL1	F	227	231	Right-handed 310
Helix 101	AL2	F	245	259	Right-handed alpha
Helix 102	AL3	F	262	266	Right-handed 310
Helix 103	AL4	F	267	279	Right-handed alpha
Helix 104	AL5	G	2	6	Right-handed 310
Helix 105	AL6	G	15	26	Right-handed alpha
Helix 106	AL7	G	35	40	Right-handed alpha
Helix 107	AL8	G	51	55	Right-handed 310
Helix 108	AL9	G	62	64	Right-handed 310
Helix 109	AM1	G	77	79	Right-handed 310
Helix 110	AM2	G	80	85	Right-handed alpha
Helix 111	AM3	G	119	126	Right-handed alpha
Helix 112	AM4	G	127	136	Right-handed alpha
Helix 113	AM5	G	150	153	Right-handed 310
Helix 114	AM6	G	154	166	Right-handed alpha
Helix 115	AM7	G	179	192	Right-handed alpha
Helix 116	AM8	G	206	215	Right-handed alpha
Helix 117	AM9	G	224	231	Right-handed 310
Helix 118	AN1	G	245	259	Right-handed alpha
Helix 119	AN2	G	262	266	Right-handed 310
Helix 120	AN3	G	267	279	Right-handed alpha
Helix 121	AN4	H	2	6	Right-handed 310
Helix 122	AN5	H	15	25	Right-handed alpha
Helix 123	AN6	H	35	40	Right-handed alpha
Helix 124	AN7	H	51	55	Right-handed 310
Helix 125	AN8	H	62	64	Right-handed 310
Helix 126	AN9	H	77	79	Right-handed 310
Helix 127	AO1	H	80	85	Right-handed alpha
Helix 128	AO2	H	119	126	Right-handed alpha
Helix 129	AO3	H	127	137	Right-handed alpha
Helix 130	AO4	H	150	153	Right-handed 310
Helix 131	AO5	H	154	166	Right-handed alpha
Helix 132	AO6	H	179	192	Right-handed alpha
Helix 133	AO7	H	206	215	Right-handed alpha
Helix 134	AO8	H	227	231	Right-handed 310
Helix 135	AO9	H	245	259	Right-handed alpha
Helix 136	AP1	H	262	266	Right-handed 310
Helix 137	AP2	H	267	278	Right-handed alpha

There are 24 sheets in PDB entry 8ASA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	34	first strand
Strand 2	A	66	70	parallel
Strand 3	A	91	94	parallel
Strand 4	A	104	106	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	58	60	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	173	first strand
Strand 2	A	143	147	parallel
Strand 3	A	193	197	parallel
Strand 4	A	218	222	parallel
Strand 5	A	236	238	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	34	first strand
Strand 2	B	66	70	parallel
Strand 3	B	91	94	parallel
Strand 4	B	104	106	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	48	first strand
Strand 2	B	58	60	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	143	147	parallel
Strand 3	B	193	197	parallel
Strand 4	B	218	222	parallel
Strand 5	B	236	238	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	34	first strand
Strand 2	C	66	70	parallel
Strand 3	C	91	94	parallel
Strand 4	C	104	106	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	48	first strand
Strand 2	C	58	60	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	173	first strand
Strand 2	C	143	147	parallel
Strand 3	C	193	197	parallel
Strand 4	C	218	222	parallel
Strand 5	C	236	238	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	34	first strand
Strand 2	D	66	70	parallel
Strand 3	D	91	94	parallel
Strand 4	D	104	106	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	48	first strand
Strand 2	D	58	60	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	173	first strand
Strand 2	D	143	147	parallel
Strand 3	D	193	197	parallel
Strand 4	D	218	222	parallel
Strand 5	D	236	238	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	34	first strand
Strand 2	E	66	70	parallel
Strand 3	E	91	94	parallel
Strand 4	E	104	106	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	48	first strand
Strand 2	E	58	60	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	173	first strand
Strand 2	E	143	147	parallel
Strand 3	E	193	197	parallel
Strand 4	E	218	222	parallel
Strand 5	E	236	238	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	34	first strand
Strand 2	F	66	70	parallel
Strand 3	F	91	94	parallel
Strand 4	F	104	106	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	48	first strand
Strand 2	F	58	60	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	171	173	first strand
Strand 2	F	143	147	parallel
Strand 3	F	193	197	parallel
Strand 4	F	218	222	parallel
Strand 5	F	236	238	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	31	34	first strand
Strand 2	G	66	70	parallel
Strand 3	G	91	94	parallel
Strand 4	G	104	106	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	48	first strand
Strand 2	G	58	60	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	171	173	first strand
Strand 2	G	143	147	parallel
Strand 3	G	193	197	parallel
Strand 4	G	218	222	parallel
Strand 5	G	236	238	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	31	34	first strand
Strand 2	H	66	70	parallel
Strand 3	H	91	94	parallel
Strand 4	H	104	106	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	46	48	first strand
Strand 2	H	58	60	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	171	173	first strand
Strand 2	H	143	147	parallel
Strand 3	H	193	197	parallel
Strand 4	H	218	222	parallel
Strand 5	H	236	238	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ASA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASA