Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ASB entry

There is 1 chain in PDB entry 8ASB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 1698
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 82 helices in PDB entry 8ASB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 9Right-handed alpha
Helix 2
AA2
A
74 76Right-handed 310
Helix 3
AA3
A
77 83Right-handed alpha
Helix 4
AA4
A
94 99Right-handed alpha
Helix 5
AA5
A
135 158Right-handed alpha
Helix 6
AA6
A
184 206Right-handed alpha
Helix 7
AA7
A
208 213Right-handed alpha
Helix 8
AA8
A
217 233Right-handed alpha
Helix 9
AA9
A
237 245Right-handed alpha
Helix 10
AB1
A
250 259Right-handed alpha
Helix 11
AB2
A
262 285Right-handed alpha
Helix 12
AB3
A
292 318Right-handed alpha
Helix 13
AB4
A
358 375Right-handed alpha
Helix 14
AB5
A
383 392Right-handed alpha
Helix 15
AB6
A
416 426Right-handed alpha
Helix 16
AB7
A
436 447Right-handed alpha
Helix 17
AB8
A
456 465Right-handed alpha
Helix 18
AB9
A
477 491Right-handed alpha
Helix 19
AC1
A
492 495Right-handed 310
Helix 20
AC2
A
496 511Right-handed alpha
Helix 21
AC3
A
512 532Right-handed alpha
Helix 22
AC4
A
602 611Right-handed alpha
Helix 23
AC5
A
611 626Right-handed alpha
Helix 24
AC6
A
638 655Right-handed alpha
Helix 25
AC7
A
656 665Right-handed alpha
Helix 26
AC8
A
665 671Right-handed alpha
Helix 27
AC9
A
672 675Right-handed 310
Helix 28
AD1
A
682 688Right-handed 310
Helix 29
AD2
A
696 716Right-handed alpha
Helix 30
AD3
A
742 750Right-handed alpha
Helix 31
AD4
A
751 756Right-handed 310
Helix 32
AD5
A
763 767Right-handed 310
Helix 33
AD6
A
768 770Right-handed 310
Helix 34
AD7
A
771 777Right-handed alpha
Helix 35
AD8
A
784 788Right-handed 310
Helix 36
AD9
A
802 822Right-handed alpha
Helix 37
AE1
A
824 840Right-handed alpha
Helix 38
AE2
A
842 846Right-handed 310
Helix 39
AE3
A
855 859Right-handed 310
Helix 40
AE4
A
860 865Right-handed alpha
Helix 41
AE5
A
874 884Right-handed alpha
Helix 42
AE6
A
889 904Right-handed alpha
Helix 43
AE7
A
926 947Right-handed alpha
Helix 44
AE8
A
954 959Right-handed 310
Helix 45
AE9
A
960 974Right-handed alpha
Helix 46
AF1
A
988 993Right-handed alpha
Helix 47
AF2
A
996 1006Right-handed alpha
Helix 48
AF3
A
1007 1009Right-handed 310
Helix 49
AF4
A
1010 1020Right-handed alpha
Helix 50
AF5
A
1029 1038Right-handed alpha
Helix 51
AF6
A
1046 1057Right-handed alpha
Helix 52
AF7
A
1083 1109Right-handed alpha
Helix 53
AF8
A
1138 1155Right-handed alpha
Helix 54
AF9
A
1155 1160Right-handed alpha
Helix 55
AG1
A
1161 1164Right-handed 310
Helix 56
AG2
A
1194 1200Right-handed alpha
Helix 57
AG3
A
1211 1228Right-handed alpha
Helix 58
AG4
A
1231 1250Right-handed alpha
Helix 59
AG5
A
1255 1257Right-handed 310
Helix 60
AG6
A
1258 1268Right-handed alpha
Helix 61
AG7
A
1270 1274Right-handed 310
Helix 62
AG8
A
1280 1284Right-handed 310
Helix 63
AG9
A
1288 1300Right-handed alpha
Helix 64
AH1
A
1301 1313Right-handed alpha
Helix 65
AH2
A
1342 1344Right-handed 310
Helix 66
AH3
A
1345 1356Right-handed alpha
Helix 67
AH4
A
1360 1368Right-handed alpha
Helix 68
AH5
A
1369 1372Right-handed 310
Helix 69
AH6
A
1378 1391Right-handed alpha
Helix 70
AH7
A
1392 1397Right-handed alpha
Helix 71
AH8
A
1403 1410Right-handed alpha
Helix 72
AH9
A
1437 1448Right-handed alpha
Helix 73
AI1
A
1457 1465Right-handed alpha
Helix 74
AI2
A
1467 1476Right-handed alpha
Helix 75
AI3
A
1512 1523Right-handed alpha
Helix 76
AI4
A
1530 1545Right-handed alpha
Helix 77
AI5
A
1551 1558Right-handed alpha
Helix 78
AI6
A
1563 1575Right-handed alpha
Helix 79
AI7
A
1596 1605Right-handed alpha
Helix 80
AI8
A
1669 1683Right-handed alpha
Helix 81
AI9
A
1687 1695Right-handed alpha
Helix 82
AJ1
A
1757 1773Right-handed alpha
Back to top of page

There are 17 sheets in PDB entry 8ASB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
176 179anti-parallel
Strand 3
A
171 172anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
67 71anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
168 169parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 337first strand
Strand 2
A
575 578anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
593 595anti-parallel
Strand 6
A
588 589anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
599 601anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 722first strand
Strand 2
A
727 730anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
872 873anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 925first strand
Strand 2
A
906 912anti-parallel
Strand 3
A
1024 1027parallel
Strand 4
A
1071 1074anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1123first strand
Strand 2
A
1127 1134anti-parallel
Strand 3
A
978 987anti-parallel
Strand 4
A
1166 1167anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1123first strand
Strand 2
A
1127 1134anti-parallel
Strand 3
A
978 987anti-parallel
Strand 4
A
1172 1176anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1178 1180first strand
Strand 2
A
1185 1187anti-parallel
Strand 3
A
1191 1192anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1339 1340first strand
Strand 2
A
1421 1422anti-parallel
Strand 3
A
1435 1436anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1486 1488first strand
Strand 2
A
1609 1611anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1496 1500first strand
Strand 2
A
1581 1585anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1700 1703first strand
Strand 2
A
1724 1728anti-parallel
Strand 3
A
1734 1740anti-parallel
Strand 4
A
1745 1747anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1750 1752first strand
Strand 2
A
1804 1808parallel
Strand 3
A
1788 1791anti-parallel
Strand 4
A
1794 1796anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il