Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ASC entry

There are 5 chains in PDB entry 8ASC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 33	TYR 534
B	ASN 6	LYS 544
C	C 0	T 18
D	G 16	G 29
E	SER 33	HIS 163

There are136 helices in PDB entry 8ASC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	50	Right-handed 310
Helix 2	AA2	A	58	77	Right-handed alpha
Helix 3	AA3	A	112	121	Right-handed alpha
Helix 4	AA4	A	123	135	Right-handed alpha
Helix 5	AA5	A	142	156	Right-handed alpha
Helix 6	AA6	A	179	197	Right-handed alpha
Helix 7	AA7	A	238	249	Right-handed alpha
Helix 8	AA8	A	312	314	Right-handed 310
Helix 9	AA9	A	330	337	Right-handed alpha
Helix 10	AB1	A	354	356	Right-handed 310
Helix 11	AB2	A	377	393	Right-handed alpha
Helix 12	AB3	A	455	469	Right-handed alpha
Helix 13	AB4	A	480	495	Right-handed alpha
Helix 14	AB5	A	510	518	Right-handed alpha
Helix 15	AB6	A	519	530	Right-handed alpha
Helix 16	AB7	B	17	22	Right-handed alpha
Helix 17	AB8	B	29	48	Right-handed alpha
Helix 18	AB9	B	69	73	Right-handed 310
Helix 19	AC1	B	87	96	Right-handed alpha
Helix 20	AC2	B	106	122	Right-handed alpha
Helix 21	AC3	B	146	158	Right-handed alpha
Helix 22	AC4	B	169	175	Right-handed alpha
Helix 23	AC5	B	198	217	Right-handed alpha
Helix 24	AC6	B	218	222	Right-handed 310
Helix 25	AC7	B	227	232	Right-handed alpha
Helix 26	AC8	B	237	241	Right-handed 310
Helix 27	AC9	B	324	332	Right-handed alpha
Helix 28	AD1	B	349	351	Right-handed 310
Helix 29	AD2	B	352	356	Right-handed 310
Helix 30	AD3	B	370	388	Right-handed alpha
Helix 31	AD4	B	447	461	Right-handed alpha
Helix 32	AD5	B	478	482	Right-handed 310
Helix 33	AD6	B	484	500	Right-handed alpha
Helix 34	AD7	B	509	517	Right-handed alpha
Helix 35	AD8	B	519	537	Right-handed alpha
Helix 36	AD9	E	45	50	Right-handed 310
Helix 37	AE1	E	58	78	Right-handed alpha
Helix 38	AE2	E	112	121	Right-handed alpha
Helix 39	AE3	E	123	135	Right-handed alpha
Helix 40	AE4	E	142	156	Right-handed alpha
Helix 41	AE5	E	174	178	Right-handed 310
Helix 42	AE6	E	179	197	Right-handed alpha
Helix 43	AE7	E	237	244	Right-handed alpha
Helix 44	AE8	E	312	314	Right-handed 310
Helix 45	AE9	E	330	339	Right-handed alpha
Helix 46	AF1	E	354	356	Right-handed 310
Helix 47	AF2	E	377	393	Right-handed alpha
Helix 48	AF3	E	455	469	Right-handed alpha
Helix 49	AF4	E	480	495	Right-handed alpha
Helix 50	AF5	E	510	518	Right-handed alpha
Helix 51	AF6	E	519	530	Right-handed alpha
Helix 52	AF7	F	17	22	Right-handed alpha
Helix 53	AF8	F	29	48	Right-handed alpha
Helix 54	AF9	F	87	96	Right-handed alpha
Helix 55	AG1	F	106	122	Right-handed alpha
Helix 56	AG2	F	146	158	Right-handed alpha
Helix 57	AG3	F	198	217	Right-handed alpha
Helix 58	AG4	F	218	222	Right-handed 310
Helix 59	AG5	F	227	232	Right-handed alpha
Helix 60	AG6	F	237	241	Right-handed 310
Helix 61	AG7	F	324	332	Right-handed alpha
Helix 62	AG8	F	349	351	Right-handed 310
Helix 63	AG9	F	352	356	Right-handed 310
Helix 64	AH1	F	370	388	Right-handed alpha
Helix 65	AH2	F	447	461	Right-handed alpha
Helix 66	AH3	F	478	482	Right-handed 310
Helix 67	AH4	F	484	500	Right-handed alpha
Helix 68	AH5	F	509	517	Right-handed alpha
Helix 69	AH6	F	519	537	Right-handed alpha
Helix 70	AH7	K	45	50	Right-handed 310
Helix 71	AH8	K	58	77	Right-handed alpha
Helix 72	AH9	K	112	121	Right-handed alpha
Helix 73	AI1	K	123	135	Right-handed alpha
Helix 74	AI2	K	142	156	Right-handed alpha
Helix 75	AI3	K	179	197	Right-handed alpha
Helix 76	AI4	K	238	249	Right-handed alpha
Helix 77	AI5	K	312	314	Right-handed 310
Helix 78	AI6	K	330	337	Right-handed alpha
Helix 79	AI7	K	354	356	Right-handed 310
Helix 80	AI8	K	377	393	Right-handed alpha
Helix 81	AI9	K	455	469	Right-handed alpha
Helix 82	AJ1	K	480	495	Right-handed alpha
Helix 83	AJ2	K	510	518	Right-handed alpha
Helix 84	AJ3	K	519	530	Right-handed alpha
Helix 85	AJ4	L	17	22	Right-handed alpha
Helix 86	AJ5	L	29	48	Right-handed alpha
Helix 87	AJ6	L	69	73	Right-handed 310
Helix 88	AJ7	L	87	96	Right-handed alpha
Helix 89	AJ8	L	106	122	Right-handed alpha
Helix 90	AJ9	L	146	158	Right-handed alpha
Helix 91	AK1	L	193	197	Right-handed 310
Helix 92	AK2	L	198	217	Right-handed alpha
Helix 93	AK3	L	218	222	Right-handed 310
Helix 94	AK4	L	227	232	Right-handed alpha
Helix 95	AK5	L	237	241	Right-handed 310
Helix 96	AK6	L	324	332	Right-handed alpha
Helix 97	AK7	L	349	351	Right-handed 310
Helix 98	AK8	L	352	356	Right-handed 310
Helix 99	AK9	L	370	388	Right-handed alpha
Helix 100	AL1	L	447	461	Right-handed alpha
Helix 101	AL2	L	478	482	Right-handed 310
Helix 102	AL3	L	484	500	Right-handed alpha
Helix 103	AL4	L	509	517	Right-handed alpha
Helix 104	AL5	L	519	537	Right-handed alpha
Helix 105	AL6	O	45	50	Right-handed 310
Helix 106	AL7	O	58	78	Right-handed alpha
Helix 107	AL8	O	112	121	Right-handed alpha
Helix 108	AL9	O	123	135	Right-handed alpha
Helix 109	AM1	O	142	156	Right-handed alpha
Helix 110	AM2	O	174	178	Right-handed 310
Helix 111	AM3	O	179	197	Right-handed alpha
Helix 112	AM4	O	237	244	Right-handed alpha
Helix 113	AM5	O	312	314	Right-handed 310
Helix 114	AM6	O	330	337	Right-handed alpha
Helix 115	AM7	O	354	356	Right-handed 310
Helix 116	AM8	O	377	393	Right-handed alpha
Helix 117	AM9	O	455	469	Right-handed alpha
Helix 118	AN1	O	480	495	Right-handed alpha
Helix 119	AN2	O	510	530	Right-handed alpha
Helix 120	AN3	P	17	22	Right-handed alpha
Helix 121	AN4	P	29	48	Right-handed alpha
Helix 122	AN5	P	87	96	Right-handed alpha
Helix 123	AN6	P	106	122	Right-handed alpha
Helix 124	AN7	P	146	158	Right-handed alpha
Helix 125	AN8	P	198	217	Right-handed alpha
Helix 126	AN9	P	218	222	Right-handed 310
Helix 127	AO1	P	227	232	Right-handed alpha
Helix 128	AO2	P	324	332	Right-handed alpha
Helix 129	AO3	P	349	351	Right-handed 310
Helix 130	AO4	P	352	356	Right-handed 310
Helix 131	AO5	P	370	388	Right-handed alpha
Helix 132	AO6	P	447	461	Right-handed alpha
Helix 133	AO7	P	478	482	Right-handed 310
Helix 134	AO8	P	484	500	Right-handed alpha
Helix 135	AO9	P	509	517	Right-handed alpha
Helix 136	AP1	P	519	537	Right-handed alpha

There are 40 sheets in PDB entry 8ASC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	109	first strand
Strand 2	A	82	88	anti-parallel
Strand 3	A	35	43	parallel
Strand 4	A	161	170	parallel
Strand 5	A	198	204	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	262	first strand
Strand 2	A	268	274	anti-parallel
Strand 3	A	366	370	anti-parallel
Strand 4	A	431	436	anti-parallel
Strand 5	A	409	416	anti-parallel
Strand 6	A	394	400	anti-parallel
Strand 7	A	345	352	anti-parallel
Strand 8	A	257	262	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	289	first strand
Strand 2	B	310	316	anti-parallel
Strand 3	B	319	322	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	304	first strand
Strand 2	B	289	297	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	329	first strand
Strand 2	A	316	322	anti-parallel
Strand 3	B	277	280	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	376	first strand
Strand 2	B	540	541	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	419	420	first strand
Strand 2	A	426	428	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	84	first strand
Strand 2	B	53	59	anti-parallel
Strand 3	B	8	15	parallel
Strand 4	B	129	135	parallel
Strand 5	B	159	165	parallel
Strand 6	B	224	226	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	252	first strand
Strand 2	B	259	268	anti-parallel
Strand 3	B	357	366	anti-parallel
Strand 4	B	417	424	anti-parallel
Strand 5	B	404	412	anti-parallel
Strand 6	B	389	396	anti-parallel
Strand 7	B	339	347	anti-parallel
Strand 8	B	247	252	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	465	first strand
Strand 2	B	474	475	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	109	first strand
Strand 2	E	82	88	anti-parallel
Strand 3	E	35	43	parallel
Strand 4	E	161	170	parallel
Strand 5	E	198	204	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	257	262	first strand
Strand 2	E	268	274	anti-parallel
Strand 3	E	366	370	anti-parallel
Strand 4	E	431	436	anti-parallel
Strand 5	E	409	416	anti-parallel
Strand 6	E	394	401	anti-parallel
Strand 7	E	344	352	anti-parallel
Strand 8	E	257	262	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	289	first strand
Strand 2	F	310	316	anti-parallel
Strand 3	F	319	322	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	304	first strand
Strand 2	F	289	297	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	325	329	first strand
Strand 2	E	316	322	anti-parallel
Strand 3	F	277	280	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	375	376	first strand
Strand 2	F	540	541	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	419	420	first strand
Strand 2	E	426	428	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	84	first strand
Strand 2	F	54	59	anti-parallel
Strand 3	F	8	15	parallel
Strand 4	F	129	135	parallel
Strand 5	F	159	165	parallel
Strand 6	F	224	226	parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	246	253	first strand
Strand 2	F	257	268	anti-parallel
Strand 3	F	357	366	anti-parallel
Strand 4	F	417	423	anti-parallel
Strand 5	F	404	412	anti-parallel
Strand 6	F	389	395	anti-parallel
Strand 7	F	341	347	anti-parallel
Strand 8	F	246	253	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	464	466	first strand
Strand 2	F	473	475	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	102	109	first strand
Strand 2	K	81	88	anti-parallel
Strand 3	K	35	43	parallel
Strand 4	K	161	170	parallel
Strand 5	K	198	204	parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	257	262	first strand
Strand 2	K	268	274	anti-parallel
Strand 3	K	366	370	anti-parallel
Strand 4	K	431	436	anti-parallel
Strand 5	K	409	416	anti-parallel
Strand 6	K	394	401	anti-parallel
Strand 7	K	344	352	anti-parallel
Strand 8	K	257	262	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	286	287	first strand
Strand 2	L	312	316	anti-parallel
Strand 3	L	319	322	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	297	304	first strand
Strand 2	L	289	296	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	325	329	first strand
Strand 2	K	316	322	anti-parallel
Strand 3	L	277	280	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	375	376	first strand
Strand 2	L	540	541	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	419	420	first strand
Strand 2	K	426	428	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	77	84	first strand
Strand 2	L	53	59	anti-parallel
Strand 3	L	8	15	parallel
Strand 4	L	129	135	parallel
Strand 5	L	159	165	parallel
Strand 6	L	224	226	parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	247	253	first strand
Strand 2	L	257	268	anti-parallel
Strand 3	L	357	366	anti-parallel
Strand 4	L	417	424	anti-parallel
Strand 5	L	404	412	anti-parallel
Strand 6	L	389	396	anti-parallel
Strand 7	L	339	347	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	464	465	first strand
Strand 2	L	474	475	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	102	109	first strand
Strand 2	O	82	88	anti-parallel
Strand 3	O	35	43	parallel
Strand 4	O	161	170	parallel
Strand 5	O	198	204	parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	257	262	first strand
Strand 2	O	268	274	anti-parallel
Strand 3	O	366	370	anti-parallel
Strand 4	O	431	436	anti-parallel
Strand 5	O	409	416	anti-parallel
Strand 6	O	394	400	anti-parallel
Strand 7	O	345	352	anti-parallel
Strand 8	O	257	262	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	286	289	first strand
Strand 2	P	310	316	anti-parallel
Strand 3	P	319	322	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	296	304	first strand
Strand 2	P	289	297	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	325	329	first strand
Strand 2	O	316	322	anti-parallel
Strand 3	P	277	280	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	375	376	first strand
Strand 2	P	540	541	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	419	420	first strand
Strand 2	O	426	428	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	77	84	first strand
Strand 2	P	53	59	anti-parallel
Strand 3	P	8	15	parallel
Strand 4	P	129	135	parallel
Strand 5	P	159	165	parallel
Strand 6	P	224	226	parallel

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There are 8 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	247	253	first strand
Strand 2	P	257	268	anti-parallel
Strand 3	P	357	366	anti-parallel
Strand 4	P	417	423	anti-parallel
Strand 5	P	404	412	anti-parallel
Strand 6	P	389	395	anti-parallel
Strand 7	P	341	347	anti-parallel
Strand 8	P	247	253	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	464	466	first strand
Strand 2	P	473	475	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ASC

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASC