Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ASG entry

There are 4 chains in PDB entry 8ASG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 1612
D
 G 28 U 29
P
 A 1 C 10
T
 U 1 U 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 8ASG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 76Right-handed 310
Helix 2
AA2
A
77 84Right-handed alpha
Helix 3
AA3
A
94 99Right-handed alpha
Helix 4
AA4
A
134 149Right-handed alpha
Helix 5
AA5
A
149 155Right-handed alpha
Helix 6
AA6
A
184 209Right-handed alpha
Helix 7
AA7
A
217 234Right-handed alpha
Helix 8
AA8
A
237 245Right-handed alpha
Helix 9
AA9
A
250 259Right-handed alpha
Helix 10
AB1
A
262 286Right-handed alpha
Helix 11
AB2
A
292 319Right-handed alpha
Helix 12
AB3
A
351 357Right-handed 310
Helix 13
AB4
A
358 375Right-handed alpha
Helix 14
AB5
A
383 393Right-handed alpha
Helix 15
AB6
A
395 400Right-handed alpha
Helix 16
AB7
A
416 426Right-handed alpha
Helix 17
AB8
A
438 447Right-handed alpha
Helix 18
AB9
A
457 465Right-handed alpha
Helix 19
AC1
A
477 491Right-handed alpha
Helix 20
AC2
A
499 511Right-handed alpha
Helix 21
AC3
A
512 531Right-handed alpha
Helix 22
AC4
A
573 575Right-handed 310
Helix 23
AC5
A
604 611Right-handed alpha
Helix 24
AC6
A
611 626Right-handed alpha
Helix 25
AC7
A
638 655Right-handed alpha
Helix 26
AC8
A
656 665Right-handed alpha
Helix 27
AC9
A
665 671Right-handed alpha
Helix 28
AD1
A
672 675Right-handed 310
Helix 29
AD2
A
682 690Right-handed 310
Helix 30
AD3
A
696 716Right-handed alpha
Helix 31
AD4
A
742 750Right-handed alpha
Helix 32
AD5
A
751 756Right-handed 310
Helix 33
AD6
A
767 779Right-handed alpha
Helix 34
AD7
A
784 788Right-handed 310
Helix 35
AD8
A
802 822Right-handed alpha
Helix 36
AD9
A
824 840Right-handed alpha
Helix 37
AE1
A
855 859Right-handed 310
Helix 38
AE2
A
860 865Right-handed alpha
Helix 39
AE3
A
873 885Right-handed alpha
Helix 40
AE4
A
893 904Right-handed alpha
Helix 41
AE5
A
926 945Right-handed alpha
Helix 42
AE6
A
954 956Right-handed 310
Helix 43
AE7
A
957 973Right-handed alpha
Helix 44
AE8
A
988 993Right-handed alpha
Helix 45
AE9
A
994 1005Right-handed alpha
Helix 46
AF1
A
1006 1009Right-handed 310
Helix 47
AF2
A
1010 1018Right-handed alpha
Helix 48
AF3
A
1019 1022Right-handed 310
Helix 49
AF4
A
1029 1040Right-handed alpha
Helix 50
AF5
A
1046 1058Right-handed alpha
Helix 51
AF6
A
1084 1109Right-handed alpha
Helix 52
AF7
A
1138 1155Right-handed alpha
Helix 53
AF8
A
1155 1160Right-handed alpha
Helix 54
AF9
A
1161 1164Right-handed 310
Helix 55
AG1
A
1194 1200Right-handed alpha
Helix 56
AG2
A
1212 1228Right-handed alpha
Helix 57
AG3
A
1231 1250Right-handed alpha
Helix 58
AG4
A
1257 1268Right-handed alpha
Helix 59
AG5
A
1280 1284Right-handed 310
Helix 60
AG6
A
1288 1300Right-handed alpha
Helix 61
AG7
A
1301 1311Right-handed alpha
Helix 62
AG8
A
1345 1353Right-handed alpha
Helix 63
AG9
A
1360 1367Right-handed alpha
Helix 64
AH1
A
1368 1373Right-handed 310
Helix 65
AH2
A
1383 1391Right-handed alpha
Helix 66
AH3
A
1392 1400Right-handed alpha
Helix 67
AH4
A
1401 1403Right-handed 310
Helix 68
AH5
A
1404 1411Right-handed alpha
Helix 69
AH6
A
1412 1414Right-handed 310
Helix 70
AH7
A
1438 1448Right-handed alpha
Helix 71
AH8
A
1457 1465Right-handed alpha
Helix 72
AH9
A
1467 1478Right-handed alpha
Helix 73
AI1
A
1514 1519Right-handed alpha
Helix 74
AI2
A
1539 1546Right-handed alpha
Helix 75
AI3
A
1563 1572Right-handed alpha
Helix 76
AI4
A
1597 1604Right-handed alpha
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There are 12 sheets in PDB entry 8ASG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
176 179anti-parallel
Strand 3
A
168 172anti-parallel
Strand 4
A
125 129parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
44 49anti-parallel
Strand 3
A
69 71anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
577 578anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
593 595anti-parallel
Strand 6
A
589 590anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
541 545anti-parallel
Strand 3
A
552 557anti-parallel
Strand 4
A
564 571anti-parallel
Strand 5
A
599 601anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 925first strand
Strand 2
A
906 911anti-parallel
Strand 3
A
1024 1027parallel
Strand 4
A
1071 1074anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1117 1123first strand
Strand 2
A
1128 1134anti-parallel
Strand 3
A
978 984anti-parallel
Strand 4
A
1172 1176anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
986 987first strand
Strand 2
A
1166 1167anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1178 1181first strand
Strand 2
A
1184 1187anti-parallel
Strand 3
A
1190 1192anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1338 1339first strand
Strand 2
A
1419 1423anti-parallel
Strand 3
A
1436 1437anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1486 1488first strand
Strand 2
A
1609 1611anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1496 1497first strand
Strand 2
A
1584 1585anti-parallel
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