Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ASL entry

There are 17 chains in PDB entry 8ASL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
a	LYS 11	GLY 751
b	THR 3	GLY 731
c	SER 2	TYR 81
d	GLU 3	VAL 141
e	ALA 2	GLN 70
f	ASP 24	ARG 165
i	MET 1	GLY 40
j	MET 1	PRO 40
k	ALA 9	MET 83
l	ASN 5	VAL 147
m	MET 1	LYS 31
A	TRP 14	ALA 344
D	TRP 32	ALA 330
E	ILE 13	PHE 56
F	VAL 17	ARG 44
I	LEU 2	PRO 28
S	HIS 31	ASN 333

There are135 helices in PDB entry 8ASL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	a	25	30	Right-handed 310
Helix 2	AA2	a	37	41	Right-handed 310
Helix 3	AA3	a	45	54	Right-handed alpha
Helix 4	AA4	a	57	62	Right-handed alpha
Helix 5	AA5	a	64	97	Right-handed alpha
Helix 6	AA6	a	99	106	Right-handed alpha
Helix 7	AA7	a	122	127	Right-handed 310
Helix 8	AA8	a	142	150	Right-handed alpha
Helix 9	AA9	a	154	182	Right-handed alpha
Helix 10	AB1	a	186	191	Right-handed alpha
Helix 11	AB2	a	192	203	Right-handed alpha
Helix 12	AB3	a	204	219	Right-handed alpha
Helix 13	AB4	a	219	229	Right-handed alpha
Helix 14	AB5	a	240	245	Right-handed alpha
Helix 15	AB6	a	245	253	Right-handed alpha
Helix 16	AB7	a	254	259	Right-handed 310
Helix 17	AB8	a	260	266	Right-handed alpha
Helix 18	AB9	a	267	274	Right-handed 310
Helix 19	AC1	a	289	308	Right-handed alpha
Helix 20	AC2	a	320	328	Right-handed alpha
Helix 21	AC3	a	339	345	Right-handed alpha
Helix 22	AC4	a	347	373	Right-handed alpha
Helix 23	AC5	a	382	415	Right-handed alpha
Helix 24	AC6	a	417	421	Right-handed 310
Helix 25	AC7	a	424	432	Right-handed alpha
Helix 26	AC8	a	432	464	Right-handed alpha
Helix 27	AC9	a	466	470	Right-handed 310
Helix 28	AD1	a	480	493	Right-handed alpha
Helix 29	AD2	a	528	555	Right-handed alpha
Helix 30	AD3	a	564	569	Right-handed 310
Helix 31	AD4	a	577	581	Right-handed 310
Helix 32	AD5	a	586	617	Right-handed alpha
Helix 33	AD6	a	634	639	Right-handed alpha
Helix 34	AD7	a	641	648	Right-handed alpha
Helix 35	AD8	a	651	653	Right-handed 310
Helix 36	AD9	a	654	659	Right-handed alpha
Helix 37	AE1	a	665	687	Right-handed alpha
Helix 38	AE2	a	689	707	Right-handed alpha
Helix 39	AE3	a	719	748	Right-handed alpha
Helix 40	AE4	b	9	14	Right-handed alpha
Helix 41	AE5	b	18	27	Right-handed alpha
Helix 42	AE6	b	30	34	Right-handed 310
Helix 43	AE7	b	38	72	Right-handed alpha
Helix 44	AE8	b	73	78	Right-handed alpha
Helix 45	AE9	b	97	105	Right-handed alpha
Helix 46	AF1	b	119	127	Right-handed alpha
Helix 47	AF2	b	131	157	Right-handed alpha
Helix 48	AF3	b	164	169	Right-handed alpha
Helix 49	AF4	b	170	181	Right-handed alpha
Helix 50	AF5	b	183	197	Right-handed alpha
Helix 51	AF6	b	197	203	Right-handed alpha
Helix 52	AF7	b	222	228	Right-handed alpha
Helix 53	AF8	b	229	233	Right-handed 310
Helix 54	AF9	b	269	289	Right-handed alpha
Helix 55	AG1	b	300	308	Right-handed alpha
Helix 56	AG2	b	319	327	Right-handed alpha
Helix 57	AG3	b	327	352	Right-handed alpha
Helix 58	AG4	b	362	395	Right-handed alpha
Helix 59	AG5	b	404	410	Right-handed alpha
Helix 60	AG6	b	412	444	Right-handed alpha
Helix 61	AG7	b	446	450	Right-handed 310
Helix 62	AG8	b	455	466	Right-handed alpha
Helix 63	AG9	b	474	478	Right-handed 310
Helix 64	AH1	b	481	485	Right-handed 310
Helix 65	AH2	b	490	499	Right-handed alpha
Helix 66	AH3	b	510	537	Right-handed alpha
Helix 67	AH4	b	546	551	Right-handed 310
Helix 68	AH5	b	568	601	Right-handed alpha
Helix 69	AH6	b	602	610	Right-handed alpha
Helix 70	AH7	b	612	620	Right-handed alpha
Helix 71	AH8	b	620	630	Right-handed alpha
Helix 72	AH9	b	640	663	Right-handed alpha
Helix 73	AI1	b	664	681	Right-handed alpha
Helix 74	AI2	b	698	730	Right-handed alpha
Helix 75	AI3	c	15	21	Right-handed alpha
Helix 76	AI4	c	44	48	Right-handed 310
Helix 77	AI5	c	52	58	Right-handed alpha
Helix 78	AI6	d	19	24	Right-handed 310
Helix 79	AI7	d	61	75	Right-handed alpha
Helix 80	AI8	d	121	125	Right-handed 310
Helix 81	AI9	d	137	141	Right-handed 310
Helix 82	AJ1	e	62	64	Right-handed 310
Helix 83	AJ2	f	35	42	Right-handed alpha
Helix 84	AJ3	f	43	45	Right-handed 310
Helix 85	AJ4	f	53	63	Right-handed alpha
Helix 86	AJ5	f	80	82	Right-handed 310
Helix 87	AJ6	f	83	114	Right-handed alpha
Helix 88	AJ7	f	119	124	Right-handed alpha
Helix 89	AJ8	f	126	136	Right-handed alpha
Helix 90	AJ9	f	139	150	Right-handed alpha
Helix 91	AK1	f	156	160	Right-handed 310
Helix 92	AK2	i	8	20	Right-handed alpha
Helix 93	AK3	i	20	36	Right-handed alpha
Helix 94	AK4	j	2	9	Right-handed alpha
Helix 95	AK5	j	10	33	Right-handed alpha
Helix 96	AK6	k	17	39	Right-handed alpha
Helix 97	AK7	k	50	55	Right-handed 310
Helix 98	AK8	k	58	82	Right-handed alpha
Helix 99	AK9	l	27	36	Right-handed alpha
Helix 100	AL1	l	45	60	Right-handed alpha
Helix 101	AL2	l	62	69	Right-handed alpha
Helix 102	AL3	l	77	104	Right-handed alpha
Helix 103	AL4	l	116	143	Right-handed alpha
Helix 104	AL5	m	4	31	Right-handed alpha
Helix 105	AL6	A	15	22	Right-handed alpha
Helix 106	AL7	A	30	55	Right-handed alpha
Helix 107	AL8	A	70	74	Right-handed 310
Helix 108	AL9	A	95	99	Right-handed 310
Helix 109	AM1	A	101	108	Right-handed alpha
Helix 110	AM2	A	109	137	Right-handed alpha
Helix 111	AM3	A	142	159	Right-handed alpha
Helix 112	AM4	A	159	166	Right-handed alpha
Helix 113	AM5	A	176	191	Right-handed alpha
Helix 114	AM6	A	195	222	Right-handed alpha
Helix 115	AM7	A	268	295	Right-handed alpha
Helix 116	AM8	A	316	330	Right-handed alpha
Helix 117	AM9	D	32	36	Right-handed 310
Helix 118	AN1	D	37	52	Right-handed alpha
Helix 119	AN2	D	101	107	Right-handed alpha
Helix 120	AN3	D	109	137	Right-handed alpha
Helix 121	AN4	D	141	157	Right-handed alpha
Helix 122	AN5	D	158	164	Right-handed alpha
Helix 123	AN6	D	166	170	Right-handed 310
Helix 124	AN7	D	175	190	Right-handed alpha
Helix 125	AN8	D	191	193	Right-handed 310
Helix 126	AN9	D	194	222	Right-handed alpha
Helix 127	AO1	D	245	257	Right-handed alpha
Helix 128	AO2	D	263	292	Right-handed alpha
Helix 129	AO3	D	298	307	Right-handed alpha
Helix 130	AO4	D	313	329	Right-handed alpha
Helix 131	AO5	E	14	40	Right-handed alpha
Helix 132	AO6	E	42	48	Right-handed alpha
Helix 133	AO7	F	18	43	Right-handed alpha
Helix 134	AO8	I	3	25	Right-handed alpha
Helix 135	AO9	S	299	304	Right-handed alpha

There are 21 sheets in PDB entry 8ASL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	16	18	first strand
Strand 2	a	183	185	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	113	115	first strand
Strand 2	a	137	138	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	514	516	first strand
Strand 2	a	519	522	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	619	621	first strand
Strand 2	a	627	629	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	4	7	first strand
Strand 2	c	65	68	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	27	30	first strand
Strand 2	c	38	41	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	53	59	first strand
Strand 2	d	27	34	anti-parallel
Strand 3	d	84	88	anti-parallel
Strand 4	d	94	98	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	38	41	first strand
Strand 2	d	47	50	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	58	61	first strand
Strand 2	e	37	40	anti-parallel
Strand 3	e	22	27	anti-parallel
Strand 4	e	8	11	anti-parallel
Strand 5	e	66	68	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	30	31	first strand
Strand 2	f	66	67	anti-parallel
Strand 3	f	73	74	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	9	10	first strand
Strand 2	l	20	21	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	66	67	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	174	175	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	343	first strand
Strand 2	S	168	170	anti-parallel
Strand 3	S	158	161	anti-parallel
Strand 4	S	149	153	anti-parallel
Strand 5	S	138	142	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	173	174	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	40	44	first strand
Strand 2	S	328	332	anti-parallel
Strand 3	S	320	323	anti-parallel
Strand 4	S	311	314	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	51	56	first strand
Strand 2	S	63	67	anti-parallel
Strand 3	S	72	75	anti-parallel
Strand 4	S	82	85	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	95	102	first strand
Strand 2	S	105	111	anti-parallel
Strand 3	S	114	118	anti-parallel
Strand 4	S	126	127	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	179	184	first strand
Strand 2	S	190	194	anti-parallel
Strand 3	S	199	203	anti-parallel
Strand 4	S	211	214	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	221	226	first strand
Strand 2	S	232	236	anti-parallel
Strand 3	S	241	243	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	268	270	first strand
Strand 2	S	277	280	anti-parallel
Strand 3	S	286	289	anti-parallel
Strand 4	S	296	298	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ASL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ASL