Analysis of interatomic Contacts of Structural Units in PDB entry:
8AT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AT2 entry

There are 4 chains in PDB entry 8AT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1ALA 230
C
 ILE 97ALA 597
D
 MET 1THR 309
E
 GLN 82SER 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 8AT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
1 17Right-handed alpha
Helix 2
AA2
B
27 78Right-handed alpha
Helix 3
AA3
B
79 83Right-handed 310
Helix 4
AA4
B
85 103Right-handed alpha
Helix 5
AA5
B
108 203Right-handed alpha
Helix 6
AA6
B
206 209Right-handed 310
Helix 7
AA7
B
210 230Right-handed alpha
Helix 8
AA8
C
98 177Right-handed alpha
Helix 9
AA9
C
193 197Right-handed 310
Helix 10
AB1
C
199 221Right-handed alpha
Helix 11
AB2
C
222 226Right-handed 310
Helix 12
AB3
C
352 425Right-handed alpha
Helix 13
AB4
C
443 455Right-handed alpha
Helix 14
AB5
C
464 512Right-handed alpha
Helix 15
AB6
C
522 560Right-handed alpha
Helix 16
AB7
C
560 567Right-handed alpha
Helix 17
AB8
C
568 576Right-handed alpha
Helix 18
AB9
C
576 590Right-handed alpha
Helix 19
AC1
D
2 12Right-handed alpha
Helix 20
AC2
D
18 25Right-handed alpha
Helix 21
AC3
D
25 39Right-handed alpha
Helix 22
AC4
D
45 90Right-handed alpha
Helix 23
AC5
D
93 117Right-handed alpha
Helix 24
AC6
D
128 132Right-handed 310
Helix 25
AC7
D
133 139Right-handed alpha
Helix 26
AC8
D
143 174Right-handed alpha
Helix 27
AC9
D
175 180Right-handed 310
Helix 28
AD1
D
181 190Right-handed alpha
Helix 29
AD2
D
191 242Right-handed alpha
Helix 30
AD3
D
245 281Right-handed alpha
Helix 31
AD4
D
282 309Right-handed alpha
Helix 32
AD5
E
83 118Right-handed alpha
Helix 33
AD6
E
121 170Right-handed alpha
Helix 34
AD7
E
190 216Right-handed alpha
Helix 35
AD8
E
223 245Right-handed alpha
Helix 36
AD9
E
246 274Right-handed alpha
Helix 37
AE1
E
279 284Right-handed 310
Helix 38
AE2
E
406 456Right-handed alpha
Helix 39
AE3
E
458 470Right-handed alpha
Helix 40
AE4
E
472 483Right-handed alpha
Helix 41
AE5
E
485 490Right-handed alpha
Helix 42
AE6
E
503 509Right-handed 310
Helix 43
AE7
E
517 529Right-handed alpha
Helix 44
AE8
E
537 575Right-handed alpha
Helix 45
AE9
E
578 596Right-handed alpha
Helix 46
AF1
E
596 628Right-handed alpha
Helix 47
AF2
E
629 633Right-handed 310
Helix 48
AF3
E
644 663Right-handed alpha
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There are 2 sheets in PDB entry 8AT2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
491 493first strand
Strand 2
E
499 501anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
638 639first strand
Strand 2
E
642 643anti-parallel
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