Analysis of interatomic Contacts of Structural Units in PDB entry:
8AT3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AT3 entry

There are 8 chains in PDB entry 8AT3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 286
B
 MET 1ALA 597
C
 MET 1PRO 353
D
 MET 1SER 666
E
 MET 1PRO 222
F
 MET 1LYS 398
G
 MET 1ASP 348
H
 VAL 155PRO 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are123 helices in PDB entry 8AT3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 17Right-handed alpha
Helix 2
AA2
A
27 78Right-handed alpha
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
A
85 102Right-handed alpha
Helix 5
AA5
A
108 203Right-handed alpha
Helix 6
AA6
A
206 209Right-handed 310
Helix 7
AA7
A
210 237Right-handed alpha
Helix 8
AA8
A
244 272Right-handed alpha
Helix 9
AA9
B
2 14Right-handed alpha
Helix 10
AB1
B
18 22Right-handed 310
Helix 11
AB2
B
23 32Right-handed 310
Helix 12
AB3
B
36 47Right-handed alpha
Helix 13
AB4
B
48 52Right-handed 310
Helix 14
AB5
B
54 67Right-handed alpha
Helix 15
AB6
B
73 83Right-handed alpha
Helix 16
AB7
B
96 177Right-handed alpha
Helix 17
AB8
B
193 197Right-handed 310
Helix 18
AB9
B
200 222Right-handed alpha
Helix 19
AC1
B
226 230Right-handed 310
Helix 20
AC2
B
242 246Right-handed 310
Helix 21
AC3
B
251 294Right-handed alpha
Helix 22
AC4
B
296 301Right-handed alpha
Helix 23
AC5
B
304 332Right-handed alpha
Helix 24
AC6
B
332 344Right-handed alpha
Helix 25
AC7
B
346 425Right-handed alpha
Helix 26
AC8
B
443 455Right-handed alpha
Helix 27
AC9
B
464 512Right-handed alpha
Helix 28
AD1
B
522 560Right-handed alpha
Helix 29
AD2
B
560 576Right-handed alpha
Helix 30
AD3
B
576 590Right-handed alpha
Helix 31
AD4
C
2 12Right-handed alpha
Helix 32
AD5
C
18 25Right-handed alpha
Helix 33
AD6
C
25 36Right-handed alpha
Helix 34
AD7
C
45 89Right-handed alpha
Helix 35
AD8
C
93 117Right-handed alpha
Helix 36
AD9
C
128 132Right-handed 310
Helix 37
AE1
C
133 139Right-handed alpha
Helix 38
AE2
C
143 174Right-handed alpha
Helix 39
AE3
C
175 180Right-handed 310
Helix 40
AE4
C
181 190Right-handed alpha
Helix 41
AE5
C
191 242Right-handed alpha
Helix 42
AE6
C
245 281Right-handed alpha
Helix 43
AE7
C
282 319Right-handed alpha
Helix 44
AE8
C
321 351Right-handed alpha
Helix 45
AE9
D
2 17Right-handed alpha
Helix 46
AF1
D
21 25Right-handed 310
Helix 47
AF2
D
27 32Right-handed alpha
Helix 48
AF3
D
33 37Right-handed 310
Helix 49
AF4
D
38 50Right-handed alpha
Helix 50
AF5
D
52 82Right-handed alpha
Helix 51
AF6
D
82 118Right-handed alpha
Helix 52
AF7
D
121 170Right-handed alpha
Helix 53
AF8
D
190 217Right-handed alpha
Helix 54
AF9
D
222 245Right-handed alpha
Helix 55
AG1
D
246 278Right-handed alpha
Helix 56
AG2
D
311 355Right-handed alpha
Helix 57
AG3
D
359 456Right-handed alpha
Helix 58
AG4
D
458 470Right-handed alpha
Helix 59
AG5
D
472 484Right-handed alpha
Helix 60
AG6
D
485 489Right-handed 310
Helix 61
AG7
D
503 509Right-handed 310
Helix 62
AG8
D
517 528Right-handed alpha
Helix 63
AG9
D
535 537Right-handed 310
Helix 64
AH1
D
538 574Right-handed alpha
Helix 65
AH2
D
578 596Right-handed alpha
Helix 66
AH3
D
596 628Right-handed alpha
Helix 67
AH4
D
629 633Right-handed 310
Helix 68
AH5
D
644 662Right-handed alpha
Helix 69
AH6
E
13 25Right-handed alpha
Helix 70
AH7
E
29 36Right-handed alpha
Helix 71
AH8
E
43 75Right-handed alpha
Helix 72
AH9
E
75 80Right-handed alpha
Helix 73
AI1
E
80 104Right-handed alpha
Helix 74
AI2
E
104 114Right-handed alpha
Helix 75
AI3
E
124 126Right-handed 310
Helix 76
AI4
E
127 144Right-handed alpha
Helix 77
AI5
E
144 154Right-handed alpha
Helix 78
AI6
E
157 215Right-handed alpha
Helix 79
AI7
E
216 220Right-handed 310
Helix 80
AI8
F
6 8Right-handed 310
Helix 81
AI9
F
9 23Right-handed alpha
Helix 82
AJ1
F
26 34Right-handed alpha
Helix 83
AJ2
F
52 68Right-handed alpha
Helix 84
AJ3
F
68 76Right-handed alpha
Helix 85
AJ4
F
84 107Right-handed alpha
Helix 86
AJ5
F
114 119Right-handed 310
Helix 87
AJ6
F
123 146Right-handed alpha
Helix 88
AJ7
F
147 149Right-handed 310
Helix 89
AJ8
F
150 159Right-handed alpha
Helix 90
AJ9
F
163 222Right-handed alpha
Helix 91
AK1
F
226 228Right-handed 310
Helix 92
AK2
F
229 251Right-handed alpha
Helix 93
AK3
F
251 263Right-handed alpha
Helix 94
AK4
F
281 291Right-handed alpha
Helix 95
AK5
F
307 330Right-handed alpha
Helix 96
AK6
F
337 365Right-handed alpha
Helix 97
AK7
F
365 390Right-handed alpha
Helix 98
AK8
F
392 397Right-handed 310
Helix 99
AK9
G
3 20Right-handed alpha
Helix 100
AL1
G
22 26Right-handed 310
Helix 101
AL2
G
32 42Right-handed alpha
Helix 102
AL3
G
44 59Right-handed alpha
Helix 103
AL4
G
60 68Right-handed alpha
Helix 104
AL5
G
70 72Right-handed 310
Helix 105
AL6
G
73 88Right-handed alpha
Helix 106
AL7
G
95 101Right-handed alpha
Helix 107
AL8
G
104 120Right-handed alpha
Helix 108
AL9
G
137 159Right-handed alpha
Helix 109
AM1
G
161 167Right-handed alpha
Helix 110
AM2
G
174 176Right-handed 310
Helix 111
AM3
G
177 182Right-handed alpha
Helix 112
AM4
G
184 194Right-handed alpha
Helix 113
AM5
G
197 221Right-handed alpha
Helix 114
AM6
G
222 226Right-handed 310
Helix 115
AM7
G
230 259Right-handed alpha
Helix 116
AM8
G
274 315Right-handed alpha
Helix 117
AM9
G
327 347Right-handed alpha
Helix 118
AN1
H
156 239Right-handed alpha
Helix 119
AN2
H
239 256Right-handed alpha
Helix 120
AN3
H
271 294Right-handed alpha
Helix 121
AN4
H
297 304Right-handed alpha
Helix 122
AN5
H
304 352Right-handed alpha
Helix 123
AN6
H
353 363Right-handed alpha
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There are 4 sheets in PDB entry 8AT3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
491 493first strand
Strand 2
D
499 501anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
638 639first strand
Strand 2
D
642 643anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
301 302first strand
Strand 2
F
305 306anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
316 317first strand
Strand 2
G
325 326anti-parallel
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