Analysis of interatomic Contacts of Structural Units in PDB entry:
8ATE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ATE entry

There is 1 chain in PDB entry 8ATE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 6LEU 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8ATE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 17Right-handed alpha
Helix 2
AA2
A
23 25Right-handed 310
Helix 3
AA3
A
34 42Right-handed alpha
Helix 4
AA4
A
45 50Right-handed 310
Helix 5
AA5
A
64 78Right-handed alpha
Helix 6
AA6
A
129 141Right-handed alpha
Helix 7
AA7
A
155 162Right-handed alpha
Helix 8
AA8
A
168 173Right-handed alpha
Helix 9
AA9
A
174 177Right-handed 310
Helix 10
AB1
A
193 205Right-handed alpha
Helix 11
AB2
A
209 213Right-handed 310
Helix 12
AB3
A
242 254Right-handed alpha
Helix 13
AB4
A
292 304Right-handed alpha
Helix 14
AB5
A
305 308Right-handed 310
Helix 15
AB6
A
310 314Right-handed 310
Helix 16
AB7
A
318 327Right-handed alpha
Helix 17
AB8
A
334 340Right-handed 310
Helix 18
AB9
A
361 375Right-handed alpha
Helix 19
AC1
A
387 392Right-handed alpha
Helix 20
AC2
A
419 438Right-handed alpha
Helix 21
AC3
A
439 441Right-handed 310
Helix 22
AC4
A
454 458Right-handed 310
Helix 23
AC5
A
465 479Right-handed alpha
Helix 24
AC6
A
481 493Right-handed alpha
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There are 4 sheets in PDB entry 8ATE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
58 61anti-parallel
Strand 3
A
102 106parallel
Strand 4
A
81 85parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 116first strand
Strand 2
A
121 125anti-parallel
Strand 3
A
215 222anti-parallel
Strand 4
A
179 185anti-parallel
Strand 5
A
191 192anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
224 225anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 317first strand
Strand 2
A
230 238anti-parallel
Strand 3
A
279 289anti-parallel
Strand 4
A
262 272anti-parallel
Strand 5
A
379 384anti-parallel
Strand 6
A
407 415anti-parallel
Strand 7
A
348 356anti-parallel
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