Analysis of interatomic Contacts of Structural Units in PDB entry:
8ATI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ATI entry

There are 4 chains in PDB entry 8ATI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 33	PHE 362
B	ARG 33	PHE 362
C	ARG 33	PHE 362
D	ARG 33	ALA 337

There are 65 helices in PDB entry 8ATI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	46	52	Right-handed alpha
Helix 2	AA2	A	64	68	Right-handed 310
Helix 3	AA3	A	69	76	Right-handed alpha
Helix 4	AA4	A	88	93	Right-handed alpha
Helix 5	AA5	A	112	119	Right-handed alpha
Helix 6	AA6	A	130	148	Right-handed alpha
Helix 7	AA7	A	148	158	Right-handed alpha
Helix 8	AA8	A	164	172	Right-handed alpha
Helix 9	AA9	A	189	200	Right-handed alpha
Helix 10	AB1	A	201	203	Right-handed 310
Helix 11	AB2	A	216	222	Right-handed alpha
Helix 12	AB3	A	228	236	Right-handed alpha
Helix 13	AB4	A	254	259	Right-handed alpha
Helix 14	AB5	A	272	276	Right-handed 310
Helix 15	AB6	A	277	287	Right-handed alpha
Helix 16	AB7	A	326	347	Right-handed alpha
Helix 17	AB8	B	46	52	Right-handed alpha
Helix 18	AB9	B	64	68	Right-handed 310
Helix 19	AC1	B	69	76	Right-handed alpha
Helix 20	AC2	B	88	93	Right-handed alpha
Helix 21	AC3	B	112	120	Right-handed alpha
Helix 22	AC4	B	130	148	Right-handed alpha
Helix 23	AC5	B	148	158	Right-handed alpha
Helix 24	AC6	B	164	172	Right-handed alpha
Helix 25	AC7	B	189	200	Right-handed alpha
Helix 26	AC8	B	201	203	Right-handed 310
Helix 27	AC9	B	216	221	Right-handed alpha
Helix 28	AD1	B	228	236	Right-handed alpha
Helix 29	AD2	B	254	261	Right-handed alpha
Helix 30	AD3	B	272	276	Right-handed 310
Helix 31	AD4	B	277	287	Right-handed alpha
Helix 32	AD5	B	326	347	Right-handed alpha
Helix 33	AD6	B	358	362	Right-handed 310
Helix 34	AD7	C	46	52	Right-handed alpha
Helix 35	AD8	C	64	68	Right-handed 310
Helix 36	AD9	C	69	76	Right-handed alpha
Helix 37	AE1	C	88	93	Right-handed alpha
Helix 38	AE2	C	112	119	Right-handed alpha
Helix 39	AE3	C	130	148	Right-handed alpha
Helix 40	AE4	C	148	158	Right-handed alpha
Helix 41	AE5	C	164	172	Right-handed alpha
Helix 42	AE6	C	189	200	Right-handed alpha
Helix 43	AE7	C	201	203	Right-handed 310
Helix 44	AE8	C	216	221	Right-handed alpha
Helix 45	AE9	C	228	236	Right-handed alpha
Helix 46	AF1	C	254	259	Right-handed alpha
Helix 47	AF2	C	272	276	Right-handed 310
Helix 48	AF3	C	277	287	Right-handed alpha
Helix 49	AF4	C	326	347	Right-handed alpha
Helix 50	AF5	C	358	362	Right-handed 310
Helix 51	AF6	D	46	52	Right-handed alpha
Helix 52	AF7	D	64	68	Right-handed 310
Helix 53	AF8	D	69	76	Right-handed alpha
Helix 54	AF9	D	88	93	Right-handed alpha
Helix 55	AG1	D	112	119	Right-handed alpha
Helix 56	AG2	D	130	148	Right-handed alpha
Helix 57	AG3	D	148	158	Right-handed alpha
Helix 58	AG4	D	164	172	Right-handed alpha
Helix 59	AG5	D	189	200	Right-handed alpha
Helix 60	AG6	D	201	203	Right-handed 310
Helix 61	AG7	D	228	236	Right-handed alpha
Helix 62	AG8	D	254	259	Right-handed alpha
Helix 63	AG9	D	272	276	Right-handed 310
Helix 64	AH1	D	277	287	Right-handed alpha
Helix 65	AH2	D	326	347	Right-handed alpha

There are 8 sheets in PDB entry 8ATI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	124	first strand
Strand 2	A	100	103	parallel
Strand 3	A	78	81	parallel
Strand 4	A	35	38	parallel
Strand 5	A	56	59	parallel
Strand 6	a	317	318	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	205	209	parallel
Strand 3	A	182	186	parallel
Strand 4	A	238	241	parallel
Strand 5	A	265	269	parallel
Strand 6	A	290	295	parallel
Strand 7	A	316	318	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	124	first strand
Strand 2	B	100	103	parallel
Strand 3	B	78	81	parallel
Strand 4	B	35	38	parallel
Strand 5	B	56	59	parallel
Strand 6	b	317	318	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	205	209	parallel
Strand 3	B	182	186	parallel
Strand 4	B	238	241	parallel
Strand 5	B	265	269	parallel
Strand 6	B	290	295	parallel
Strand 7	B	316	318	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	124	first strand
Strand 2	C	100	103	parallel
Strand 3	C	78	81	parallel
Strand 4	C	35	38	parallel
Strand 5	C	56	59	parallel
Strand 6	c	317	318	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	205	209	parallel
Strand 3	C	182	186	parallel
Strand 4	C	238	241	parallel
Strand 5	C	265	269	parallel
Strand 6	C	290	295	parallel
Strand 7	C	316	318	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	38	first strand
Strand 2	D	78	81	parallel
Strand 3	D	100	103	parallel
Strand 4	D	122	124	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	205	209	parallel
Strand 3	D	182	186	parallel
Strand 4	D	238	241	parallel
Strand 5	D	266	269	parallel
Strand 6	D	292	295	parallel
Strand 7	D	316	318	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ATI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ATI