Analysis of interatomic Contacts of Structural Units in PDB entry:
8AUC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AUC entry

There are 2 chains in PDB entry 8AUC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 41ILE 600
B
 PRO 24ILE 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8AUC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 123Right-handed alpha
Helix 2
AA2
A
147 241Right-handed alpha
Helix 3
AA3
A
242 309Right-handed alpha
Helix 4
AA4
A
316 386Right-handed alpha
Helix 5
AA5
A
461 475Right-handed alpha
Helix 6
AA6
A
512 522Right-handed alpha
Helix 7
AA7
A
523 525Right-handed 310
Helix 8
AA8
A
531 536Right-handed alpha
Helix 9
AA9
A
543 547Right-handed 310
Helix 10
AB1
A
556 560Right-handed 310
Helix 11
AB2
B
25 123Right-handed alpha
Helix 12
AB3
B
144 238Right-handed alpha
Helix 13
AB4
B
244 309Right-handed alpha
Helix 14
AB5
B
316 384Right-handed alpha
Helix 15
AB6
B
461 474Right-handed alpha
Helix 16
AB7
B
512 523Right-handed alpha
Helix 17
AB8
B
531 536Right-handed alpha
Helix 18
AB9
B
543 547Right-handed 310
Helix 19
AC1
B
556 560Right-handed 310
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There are 2 sheets in PDB entry 8AUC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
540 542first strand
Strand 2
A
596 598anti-parallel
Strand 3
A
551 555anti-parallel
Strand 4
A
562 568anti-parallel
Strand 5
A
571 574anti-parallel
Strand 6
A
583 586anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
540 542first strand
Strand 2
B
596 598anti-parallel
Strand 3
B
551 555anti-parallel
Strand 4
B
562 568anti-parallel
Strand 5
B
571 574anti-parallel
Strand 6
B
583 586anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il