Analysis of interatomic Contacts of Structural Units in PDB entry:
8AW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AW4 entry

There are 2 chains in PDB entry 8AW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 11LYS 198
B
 GLY 42TRP 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8AW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 24Right-handed alpha
Helix 2
AA2
A
28 43Right-handed alpha
Helix 3
AA3
A
44 46Right-handed 310
Helix 4
AA4
A
47 55Right-handed alpha
Helix 5
AA5
A
59 74Right-handed alpha
Helix 6
AA6
A
75 77Right-handed 310
Helix 7
AA7
A
78 86Right-handed alpha
Helix 8
AA8
A
90 105Right-handed alpha
Helix 9
AA9
A
106 108Right-handed 310
Helix 10
AB1
A
109 117Right-handed alpha
Helix 11
AB2
A
121 136Right-handed alpha
Helix 12
AB3
A
137 139Right-handed 310
Helix 13
AB4
A
140 148Right-handed alpha
Helix 14
AB5
A
152 167Right-handed alpha
Helix 15
AB6
A
168 182Right-handed alpha
Helix 16
AB7
A
183 197Right-handed alpha
Helix 17
AB8
B
43 45Right-handed 310
Helix 18
AB9
B
46 54Right-handed alpha
Helix 19
AC1
B
58 73Right-handed alpha
Helix 20
AC2
B
74 76Right-handed 310
Helix 21
AC3
B
77 85Right-handed alpha
Helix 22
AC4
B
89 104Right-handed alpha
Helix 23
AC5
B
105 107Right-handed 310
Helix 24
AC6
B
108 115Right-handed alpha
Helix 25
AC7
B
116 118Right-handed 310
Helix 26
AC8
B
120 135Right-handed alpha
Helix 27
AC9
B
137 152Right-handed alpha
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There are no sheets in PDB entry 8AW4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il