Analysis of interatomic Contacts of Structural Units in PDB entry:
8AY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AY2 entry

There are 2 chains in PDB entry 8AY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 557THR 967
B
 SER 556THR 967
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8AY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
564 572Right-handed alpha
Helix 2
AA2
A
578 598Right-handed alpha
Helix 3
AA3
A
601 629Right-handed alpha
Helix 4
AA4
A
635 643Right-handed alpha
Helix 5
AA5
A
643 653Right-handed alpha
Helix 6
AA6
A
653 658Right-handed alpha
Helix 7
AA7
A
675 692Right-handed alpha
Helix 8
AA8
A
697 701Right-handed 310
Helix 9
AA9
A
704 737Right-handed alpha
Helix 10
AB1
A
739 743Right-handed 310
Helix 11
AB2
A
754 796Right-handed alpha
Helix 12
AB3
A
812 833Right-handed alpha
Helix 13
AB4
A
834 843Right-handed alpha
Helix 14
AB5
A
844 857Right-handed alpha
Helix 15
AB6
A
858 860Right-handed 310
Helix 16
AB7
A
864 887Right-handed alpha
Helix 17
AB8
A
890 903Right-handed alpha
Helix 18
AB9
A
906 918Right-handed alpha
Helix 19
AC1
A
922 937Right-handed alpha
Helix 20
AC2
A
942 967Right-handed alpha
Helix 21
AC3
B
564 572Right-handed alpha
Helix 22
AC4
B
579 596Right-handed alpha
Helix 23
AC5
B
598 600Right-handed 310
Helix 24
AC6
B
601 629Right-handed alpha
Helix 25
AC7
B
635 643Right-handed alpha
Helix 26
AC8
B
643 653Right-handed alpha
Helix 27
AC9
B
653 658Right-handed alpha
Helix 28
AD1
B
676 692Right-handed alpha
Helix 29
AD2
B
697 701Right-handed 310
Helix 30
AD3
B
704 732Right-handed alpha
Helix 31
AD4
B
755 792Right-handed alpha
Helix 32
AD5
B
793 795Right-handed 310
Helix 33
AD6
B
797 801Right-handed 310
Helix 34
AD7
B
812 831Right-handed alpha
Helix 35
AD8
B
834 843Right-handed alpha
Helix 36
AD9
B
844 857Right-handed alpha
Helix 37
AE1
B
858 860Right-handed 310
Helix 38
AE2
B
864 887Right-handed alpha
Helix 39
AE3
B
891 902Right-handed alpha
Helix 40
AE4
B
903 905Right-handed 310
Helix 41
AE5
B
906 918Right-handed alpha
Helix 42
AE6
B
922 936Right-handed alpha
Helix 43
AE7
B
946 966Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8AY2.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
561 562first strand
Strand 2
B
577 578anti-parallel
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