Analysis of interatomic Contacts of Structural Units in PDB entry:
8AZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8AZA entry

There are 3 chains in PDB entry 8AZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 159ASN 234
A
 SER 8LEU 314
B
 SER 8LEU 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8AZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
162 170Right-handed alpha
Helix 2
AA2
C
180 188Right-handed alpha
Helix 3
AA3
C
215 224Right-handed alpha
Helix 4
AA4
C
227 234Right-handed alpha
Helix 5
AA5
A
56 73Right-handed alpha
Helix 6
AA6
A
103 107Right-handed alpha
Helix 7
AA7
A
117 136Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
208 225Right-handed alpha
Helix 10
AB1
A
235 243Right-handed alpha
Helix 11
AB2
A
261 273Right-handed alpha
Helix 12
AB3
A
282 295Right-handed alpha
Helix 13
AB4
A
298 313Right-handed alpha
Helix 14
AB5
B
14 16Right-handed 310
Helix 15
AB6
B
60 73Right-handed alpha
Helix 16
AB7
B
102 108Right-handed alpha
Helix 17
AB8
B
117 136Right-handed alpha
Helix 18
AB9
B
164 168Right-handed 310
Helix 19
AC1
B
209 225Right-handed alpha
Helix 20
AC2
B
261 273Right-handed alpha
Helix 21
AC3
B
282 297Right-handed alpha
Helix 22
AC4
B
298 314Right-handed alpha
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There are 8 sheets in PDB entry 8AZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
189 191first strand
Strand 2
C
198 200anti-parallel
Strand 3
C
206 207anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
91 96anti-parallel
Strand 5
A
81 86anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
152 154anti-parallel
Strand 3
A
160 162anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
169 170anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 26first strand
Strand 2
B
31 37anti-parallel
Strand 3
B
43 48anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
91 94anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
169 170anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
160 162anti-parallel
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