Analysis of interatomic Contacts of Structural Units in PDB entry:
8B01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B01 entry

There are 3 chains in PDB entry 8B01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 153
B
 MET 1LEU 427
C
 ALA 14SER 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8B01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 8Right-handed alpha
Helix 2
AA2
A
8 35Right-handed alpha
Helix 3
AA3
A
41 64Right-handed alpha
Helix 4
AA4
A
73 77Right-handed 310
Helix 5
AA5
A
78 111Right-handed alpha
Helix 6
AA6
A
123 128Right-handed alpha
Helix 7
AA7
A
128 152Right-handed alpha
Helix 8
AA8
B
2 15Right-handed alpha
Helix 9
AA9
B
17 33Right-handed alpha
Helix 10
AB1
B
35 39Right-handed 310
Helix 11
AB2
B
40 50Right-handed alpha
Helix 12
AB3
B
52 54Right-handed 310
Helix 13
AB4
B
55 70Right-handed alpha
Helix 14
AB5
B
71 85Right-handed alpha
Helix 15
AB6
B
92 104Right-handed alpha
Helix 16
AB7
B
108 127Right-handed alpha
Helix 17
AB8
B
130 142Right-handed alpha
Helix 18
AB9
B
143 148Right-handed alpha
Helix 19
AC1
B
151 162Right-handed alpha
Helix 20
AC2
B
164 172Right-handed alpha
Helix 21
AC3
B
172 195Right-handed alpha
Helix 22
AC4
B
203 213Right-handed alpha
Helix 23
AC5
B
215 217Right-handed 310
Helix 24
AC6
B
218 230Right-handed alpha
Helix 25
AC7
B
234 252Right-handed alpha
Helix 26
AC8
B
258 292Right-handed alpha
Helix 27
AC9
B
294 307Right-handed alpha
Helix 28
AD1
B
309 325Right-handed alpha
Helix 29
AD2
B
329 337Right-handed alpha
Helix 30
AD3
B
337 349Right-handed alpha
Helix 31
AD4
B
351 367Right-handed alpha
Helix 32
AD5
B
373 384Right-handed alpha
Helix 33
AD6
B
386 395Right-handed alpha
Helix 34
AD7
B
398 411Right-handed alpha
Helix 35
AD8
B
412 423Right-handed alpha
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There are 3 sheets in PDB entry 8B01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
121 122anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 22first strand
Strand 2
C
77 83anti-parallel
Strand 3
C
67 72anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 59first strand
Strand 2
C
45 51anti-parallel
Strand 3
C
34 39anti-parallel
Strand 4
C
91 96anti-parallel
Strand 5
C
112 114anti-parallel
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