Analysis of interatomic Contacts of Structural Units in PDB entry:
8B0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8B0Q entry

There is 1 chain in PDB entry 8B0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 367ARG 608
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8B0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
368 378Right-handed alpha
Helix 2
AA2
A
414 417Right-handed 310
Helix 3
AA3
A
429 442Right-handed alpha
Helix 4
AA4
A
443 450Right-handed alpha
Helix 5
AA5
A
461 476Right-handed alpha
Helix 6
AA6
A
521 546Right-handed alpha
Helix 7
AA7
A
562 570Right-handed alpha
Helix 8
AA8
A
575 582Right-handed alpha
Helix 9
AA9
A
583 589Right-handed alpha
Helix 10
AB1
A
594 606Right-handed alpha
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There are 2 sheets in PDB entry 8B0Q. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
399 408anti-parallel
Strand 3
A
418 421anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
399 408anti-parallel
Strand 3
A
386 396anti-parallel
Strand 4
A
455 459parallel
Strand 5
A
481 484parallel
Strand 6
A
491 492anti-parallel
Strand 7
A
514 515anti-parallel
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